Gene Sros_6144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6144 
Symbol 
ID8669442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6740440 
End bp6741102 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content69% 
IMG OID 
ProductTrkA-N 
Protein accessionYP_003341617 
Protein GI271967421 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.674267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.153677 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTGGCA GAGGAAACGA TCCCGTCGTG GTGGTCGGGC TCGGCAGGTT CGGCAGCTCG 
CTCGCCGTGG AGCTCGCCCG CAGGGGCACC GAGGTGCTGG CCATCGACAG CCGCCCCAAG
GTGGTGCAGA GCCTGGCGGG CAAGCTCACC CATGTCGTCG CCGCGGACTC CACCGACCTG
GAGGCCCTGC GCCAGCTCGG CGTGCCCGAC TACTATCGGG CGGTGGTCGC CATCGGCACC
GACATCGAGT CCAGCATTCT CACCACGTCC CTGCTGGTCG AGCTGGAGAT CGAGGACGTC
TGGGCCAAGG CGGTCAGCCG CGATCACGGG CGCATCCTGG AGCGCGTGGG CGCCCACCAC
GTGATCCTTC CCGAGCACGA CATGGGGGAA CGCCTGGCCC GCCTGCTGAA CGGGCGGATG
CTCGACTACA TGGGGGTGGA CGGCAACTAC GCGCTGGTCA AGACCAAGCC TCCCCGGGAG
TTCGTCGGCG TCCCCCTCGC GCGGTCCGGC CTGCGCCGCA AATACGGGGT GACCGTGGTC
TGCGTCAAGG GCCAGCACGA CGAGTTCACC TACGCCGCGG CGGACACCGT CCTGAGCTAC
GGGGACGTGA TCATCATCGC GGGCACGGTC GAGCAGGTGG AGCGGTTCAC CGAGCTGCCG
TGA
 
Protein sequence
MAGRGNDPVV VVGLGRFGSS LAVELARRGT EVLAIDSRPK VVQSLAGKLT HVVAADSTDL 
EALRQLGVPD YYRAVVAIGT DIESSILTTS LLVELEIEDV WAKAVSRDHG RILERVGAHH
VILPEHDMGE RLARLLNGRM LDYMGVDGNY ALVKTKPPRE FVGVPLARSG LRRKYGVTVV
CVKGQHDEFT YAAADTVLSY GDVIIIAGTV EQVERFTELP