Gene Sros_6138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6138 
Symbol 
ID8669436 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6732716 
End bp6733927 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content76% 
IMG OID 
ProductSignal transduction histidine kinase-like protein 
Protein accessionYP_003341611 
Protein GI271967415 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.278868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.229544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACCACC CCCGCAACGC CCTGCAGGCC CTCGCCGGGC GGCCGCTGCG CTTCCTGCGG 
TCGGCGTGGC CGTGGCGCTC GCTGGCGTAC CTGCTGTCGG GCGCGGTGTT CGGCGTCGTC
GCGTCCCTGG TGGTCTACGT CGCGCTCACC GCCGGAGTGA TGGCCGCCGT GGCGCTGGCG
GCGGTCGCCG CCGTGCCCGG CGGGCTGGTG GCGGGCCGCT TCGAGCGGTG GCGGCTGCGG
CTGGTCGACG GGGTGCCTGC CGCCGACCCG CACGAACGGC CCGGCGCTCC CGGCCCTCGC
GGCTGGCTGC GCACCCGGCT GCGGGAGCAG GCCACCTGGC GCGAGGCCGG CTACGCACTG
CTCTCGGTCC TCGCGCTGTG GTGGGTCGAC CTGGGGGCGA TCGGCGTCGG CGGCGTGCTC
CCGGGCGTGC TGCTCACCGC GCCGCTCCAG CCGGACACGC CCCTGTCCCT CAGCCTGCCC
CTGGCCCTGG CCGGAGCGGT GATCATGCCG ACCGCCGCCT ACCCGATCAC CGCCTGGGCC
GGGGCCCGCG CCACCATGGC CAGGGCGCTC CTCGGGTCTC CCGACCCCGA GCTGGCCGAG
GTCGTCCGGT CCCGGGCCCG ACTGGTCGAC GCCTTCGAGA TCGAACGGCG CAGGATCGAG
CGGGACCTGC ACGACGGCGC CCAGCAGCGG CTGGTCGCGC TGACGCTGAA GCTCGGCATG
GCCCAGCTCG ACCTGGAGCC CGGTTCCCCG GCCGCGGAGC GGGTCGCCGA GGCGCACGAG
GAGGCCATGC GGGCCCTGGC CGAGCTGCGG GAGCTGATCC GCGGGGTGCA CCCGCGGATC
CTCACCGACC TCGGGCTGCC CGAGGCGGTG CTTGACGTGG CCGGGCGCTC ACCGGTCCCG
GTGGAGGTGG ACATCGTGCT CGCGCGGCGG CTGCCCGCGG CGACCGAGAC GACCGCCTAC
TTCGTGGTCA GCGAGGCGCT CGCCAACGTG GCGAAGCACA GCCGAGCCGC CCGCTGCCTG
ATACGCGGCC GCCTCACGCG GGAGAGCCTG GTGATGGAGA TCAGCGACGA CGGCGAGGGC
GGAGCCGATC CGGTCTCGGG CACCGGGTTG GCCGGGCTGG CCGACCGGGT CGCGGTGCTC
AGCGGCACGA TGTCACTGTC CAGTCCGGCC GGAGGGCCGA CCACACTGAG GGTGGAGATC
CCATGTGCGT AG
 
Protein sequence
MHHPRNALQA LAGRPLRFLR SAWPWRSLAY LLSGAVFGVV ASLVVYVALT AGVMAAVALA 
AVAAVPGGLV AGRFERWRLR LVDGVPAADP HERPGAPGPR GWLRTRLREQ ATWREAGYAL
LSVLALWWVD LGAIGVGGVL PGVLLTAPLQ PDTPLSLSLP LALAGAVIMP TAAYPITAWA
GARATMARAL LGSPDPELAE VVRSRARLVD AFEIERRRIE RDLHDGAQQR LVALTLKLGM
AQLDLEPGSP AAERVAEAHE EAMRALAELR ELIRGVHPRI LTDLGLPEAV LDVAGRSPVP
VEVDIVLARR LPAATETTAY FVVSEALANV AKHSRAARCL IRGRLTRESL VMEISDDGEG
GADPVSGTGL AGLADRVAVL SGTMSLSSPA GGPTTLRVEI PCA