Gene Sros_6132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6132 
Symbol 
ID8669430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6726992 
End bp6728971 
Gene Length1980 bp 
Protein Length659 aa 
Translation table11 
GC content69% 
IMG OID 
Productthreonyl-tRNA synthetase 
Protein accessionYP_003341606 
Protein GI271967410 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.158599 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.452434 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGCCG TGCCAGAACT TCGTATCACC CTCGCCGGAG CCGAGCGTGT GGTGGCGGAG 
GGCACGACGT ACGGCGAAGC GCTCCAGGCC GACGGCCGCT CCGTGGTCGC CGCCCGCGCG
AACGGCGAGC TGAGGGACCT GGCGGCCCGC GTGGCCGAGG GGGACGAGGT CGAGCCGGTC
GAGGTCGGCA GCCCCGACGG CCGGGCGATC GTGCGCCACT CCACCGCCCA CGTGATGGCC
CAGGCCGTCC AGGAGCTGTT CCCCGAGGCG AAGCTGGGCA TCGGCCCGCC GGTCGACAAC
GGCTTCTACT ACGACTTCGA CGTCAAGAAC CCGTTCACCC CCGAGGATCT CAAGCGCGTC
GAGAAGCGCA TGCGCGAGAT CGTCAAGCAG GGGCAGATCT TCTCCCGCCG GCCCGTCTCC
GACGAGGACG CGCTCGAGGA GCTGGCGGCC GAGCCGTACA AGCTGGAGCT CATCGGCCTC
AAGGGCGGTG CCGGCGCGCA GGCGGACGGG GCCGACGTCG AGGTGGGCGG CGCCGAGCTG
ACCATCTACG ACAACCTCGA CCCGAAGACC GGCGACCTGT GCTGGAAGGA CCTGTGCCGC
GGCCCGCACG TGCCGACCAC CCGGTCCATC CCGGCCTTCA AGCTGATGCG CTCCGGCGGC
GCCTACTGGC GGGGCAGCGA GAAGAACCCG CAGCTCCAGC GGATCTACGG CACCGCCTGG
GAGTCGCGCG ACAAGCAGGA CGAATACCTC CACATGCTGG AGGAGGCCGA GAAGCGCGAC
CACCGCAGGC TGGGCGCCGA GCTGGACCTG TTCAGCTTCC CGTCCGAGCT GGGCAGCGGC
CTGCCGGTCT TCCATCCCAA GGGCGGGATC ATCCGCAAGG AGATGGAAGA CTACATGCGC
AGGCGGCAGG GCGAGGCGGG CTACGAGTTC GTCAACACCC CGCACATCAC CAAGTCGCAG
CTGTTCGAGA CCTCCGGTCA CCTGCCCTGG TACGCCGAGG ACATGTTCCC GCCCTTCGAG
CTGGAGGGGG TCGAATACCG CGTCAAGCCG ATGAACTGCC CGATGCACAA TCTGATCTTC
CGGGCGCGCG GGCGGTCCTA CCGTGAGCTG CCGCTGCGGC TGTGCGAGTT CGGCTCCGTC
TACCGCTACG AGAAGTCGGG CGTCGTCCAC GGCCTGACCC GGGTGCGCGG CATGACGCAG
GACGACTCGC ACATCTACTG CACCCGGGAG CAGATGGTCG GCGAGATCAA GAGTCTGCTC
ACCTTCGTGC TCAGCGTGCT GCGCGACTTC GGCCTGTCGG AGTTCTACCT GGAGCTGTCC
ACCCGCGACG ACTCCGACAA GTTCATCGGT GATCCGGCCG ACTGGGACGA GGCCACCGAC
GCGCTGCGCC AGACGGCCCT GGAGTCGGGG CTCGAACTGG TCGACGACCC GGGCGGCGCG
GCCTTCTACG GCCCCAAGAT CTCGGTGCAG GCCAAGGACG CGATCGGCCG TACCTGGCAG
CTGTCCACCA TCCAGCTCGA CCTCAACCAG CCCAAGCGGT TCGAGCTCGA ATACCAGGCC
GCCGACGGCA GCCGGCAGAC GCCCGTCATG ATCCACCGGG CGCTGTTCGG GTCGATCGAG
CGCTTCCTCG GCGTCCTCAC CGAGCACTAC GCCGGCGCCT TCCCCCCCTG GCTCGCCCCG
GTCCAGGTCG TCGGCATCCC GATCGCCGAG GCTCACGCGT CCTACCTGCA GGACGTGGCC
AAGAGGGCTC GCGAGCGGGG CATCCGGATC GAGGTGGACG CCTCCGACGA CCGGATGCAG
AAGAAGATCC GCAACGCGCA GAAGTCGAAG GTGCCGTTCA TGCTCCTGGC GGGCGACGAG
GACATCGCCA ACGGCGCGGT CTCCTTCCGT TTCCGCAACG GTGAGCAGAA GAACGGCGTG
CCGGTCGACG AGGCGATCAA CGAGATCGTC GACGCGATCG AGCGTCGCAT CCAGGTCTGA
 
Protein sequence
MSAVPELRIT LAGAERVVAE GTTYGEALQA DGRSVVAARA NGELRDLAAR VAEGDEVEPV 
EVGSPDGRAI VRHSTAHVMA QAVQELFPEA KLGIGPPVDN GFYYDFDVKN PFTPEDLKRV
EKRMREIVKQ GQIFSRRPVS DEDALEELAA EPYKLELIGL KGGAGAQADG ADVEVGGAEL
TIYDNLDPKT GDLCWKDLCR GPHVPTTRSI PAFKLMRSGG AYWRGSEKNP QLQRIYGTAW
ESRDKQDEYL HMLEEAEKRD HRRLGAELDL FSFPSELGSG LPVFHPKGGI IRKEMEDYMR
RRQGEAGYEF VNTPHITKSQ LFETSGHLPW YAEDMFPPFE LEGVEYRVKP MNCPMHNLIF
RARGRSYREL PLRLCEFGSV YRYEKSGVVH GLTRVRGMTQ DDSHIYCTRE QMVGEIKSLL
TFVLSVLRDF GLSEFYLELS TRDDSDKFIG DPADWDEATD ALRQTALESG LELVDDPGGA
AFYGPKISVQ AKDAIGRTWQ LSTIQLDLNQ PKRFELEYQA ADGSRQTPVM IHRALFGSIE
RFLGVLTEHY AGAFPPWLAP VQVVGIPIAE AHASYLQDVA KRARERGIRI EVDASDDRMQ
KKIRNAQKSK VPFMLLAGDE DIANGAVSFR FRNGEQKNGV PVDEAINEIV DAIERRIQV