| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_6127 |
|---|
| Symbol | |
|---|
| ID | 8669425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 6719310 |
|---|
| End bp | 6721442 |
|---|
| Gene Length | 2133 bp |
|---|
| Protein Length | 710 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | elongation factor G |
|---|
| Protein accession | YP_003341601 |
|---|
| Protein GI | 271967405 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.220969 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.933466 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAGAGA AAGCAACCGG CGGGGCAGCG GGAGCCGCGG GGAGGGCACC TGCGGCCGAC
CGGCCGGACA TGGTCAGGAA TGTCGTGCTG GTCGGCCATT CCGGCGCGGG GAAGACGACG
CTCGTGGAGG CGCTTCTGGC CGCTACCCGG ACCGTCCAGC GGCCCGGCCG GGTCGAGGAC
GGCACCACGG TCAGCGACTT CGACGAGGTC GAGGTGCGCC AGCAGCGCTC GGTGAACCTG
ACCGTCGCCC CGATGGTCCA CAACGACATC AAGATCAACC TACTGGACAC CCCCGGCTAC
GCCGACTTCG TCGGCGACCT GCGCGCCGGG CTGCGCGCGG CCGACGCGGC GCTGTTCGTG
GTCTCGGCGT CCGAGGGCGT GGACGGCCTG ACGCGGATGC TGTGGGAGGA GTGCGCGACG
GTCGGGATGC CGCGGGCGGT CGTGATCACG AAGATCGACC ACCAGCGGGC CGACTTCGAG
GAGGCCCTCA CCGCCTGCCA GGACCTCTTC GGCGAGGGAG TGGCCCCGCT GTACCTGCCG
GTGGTCACCA ACGGCCGGAT GAACGGCCTG ATCGGGCTGC TGACCCAGAA GTTCTACAAC
TACGCCACCG GGACCCGGAC CGAGAACGCC CCGGGGCCCT CCTACGAGGA CCAGATCGAG
CAGTACCGCG GCGCCCTGAT CGAGGGGATC ATCCAGGAGA GCGAGGACGA GTCCCTGATG
GACCGTTACC TCTCCGGGGA GGAGATCGAC ACCAAGGTCC TCATCGACGA CCTGGAGAAG
GCGGTCGCGC GCGGCGGCTT CTACCCGGTG CTCGCCACCG GGACCGGCGT GGGCGCGACG
GAGGTCCTCG AACTCATCAC CCAGGGCTTC CCCTCCCCCC TGGAGCACCC GATGCCGGAG
ATCACCGAGA TCGGCGGCGC GCCGGTCGCC GGCATCACCT GCGACCCCGA CGGACCGCTG
GTGGCCGAGG TCGTCAAGAC CACCAGCGAC CCCTACGTGG GCCGGATCAG CCTGGTGCGG
GTGTTCTCCG GGACGCTGCG CCCGGACATG ACCGTCCACG TCTCCGGGCA CGGCATGGCC
GACCGCGGCC ACGAGGACCA CGACGTGGAC GAGCGCATCG GCGCGCTGTC CTCGCCCCTG
GGCAAGCTGC AGCGGACGAC CGGCAAATGC GTGGCCGGCG ACATCGTGGC GGTGGCCAAG
CTGTCGCGCG CGGAGACCGG CGACACCCTT TCCGACAAGG ACCGGCCGCT GCTGATGACC
TCCTGGACGA TGCCCGATCC GCTGCTGCCG GTGGCGATCC AGGCCAGGTC CAAGGCGGAC
GACGACAAAC TGGGCCAGGC GCTGCAGCGG CTGGTCGCCG AGGACCCCAC GCTCCGGCTG
GAGAACAACG CCGAGACCCG GCAGCTCGTG CTGTGGTGCA TGGGCGAGGC CCACGCCGAC
GTGCTGCTGG ACCGGCTGAG CAAGCGGCAC GGCGTCGAGG TGGAGAAGAT CGAGCTGCGG
GTCCCGCTCC GGGAGACCTT CGGCGGCAGG TGCCAGGCGC TGGGACGCAA CGTCAAACAG
ACCGGCGGTC ACGGGCAGTT CGCCATCTGC CATCTGGAGG TCGAGCCCCT GCCCTCCGGC
GAGGGCTTCG AGTTCGTGGA CAAGATCGTC GGTGGTGTGG TCCCGCGCCA GTTCATCCCC
TCGGTGGAGA AGGGCGTCCG CACCCAGATG CAGCGCGGCG TGGTGGCCGG CTATCCCATG
GTGGACGTGC GGGTGACGCT GTACGACGGC AAGGCCCACT CGGTCGACTC CTCCGACATG
GCTTTCCAGA TCGCCGGGGC CCTCGCGCTG AAGGAGGCCG CGGCCAAGGT GCCGACCCTG
CTGCTGGAAC CGGTCGACGA GGTGGCCGTG CTGGTCTCCG ACGACCACGT CGGCGCCGTG
ATGTCCGACC TGTCCTCCCG CCGCGGCCGG GTCCTCGGCA CCGAGCAGGT CGGCATCGGC
CGTACCCTCG TCCGGGCCGA GGTGCCCGAG CTGGAGATCA CCCGCTACGC CATCGATCTG
AGATCGATGT CACACGGCAC GGGGACGTTC CAGCGCACCT TCCTGCGTTA TGAGCCGCTC
CCGGCCCACC TGGTGGACAA GGTCGCCGGT TGA
|
|---|
| Protein sequence | MAEKATGGAA GAAGRAPAAD RPDMVRNVVL VGHSGAGKTT LVEALLAATR TVQRPGRVED
GTTVSDFDEV EVRQQRSVNL TVAPMVHNDI KINLLDTPGY ADFVGDLRAG LRAADAALFV
VSASEGVDGL TRMLWEECAT VGMPRAVVIT KIDHQRADFE EALTACQDLF GEGVAPLYLP
VVTNGRMNGL IGLLTQKFYN YATGTRTENA PGPSYEDQIE QYRGALIEGI IQESEDESLM
DRYLSGEEID TKVLIDDLEK AVARGGFYPV LATGTGVGAT EVLELITQGF PSPLEHPMPE
ITEIGGAPVA GITCDPDGPL VAEVVKTTSD PYVGRISLVR VFSGTLRPDM TVHVSGHGMA
DRGHEDHDVD ERIGALSSPL GKLQRTTGKC VAGDIVAVAK LSRAETGDTL SDKDRPLLMT
SWTMPDPLLP VAIQARSKAD DDKLGQALQR LVAEDPTLRL ENNAETRQLV LWCMGEAHAD
VLLDRLSKRH GVEVEKIELR VPLRETFGGR CQALGRNVKQ TGGHGQFAIC HLEVEPLPSG
EGFEFVDKIV GGVVPRQFIP SVEKGVRTQM QRGVVAGYPM VDVRVTLYDG KAHSVDSSDM
AFQIAGALAL KEAAAKVPTL LLEPVDEVAV LVSDDHVGAV MSDLSSRRGR VLGTEQVGIG
RTLVRAEVPE LEITRYAIDL RSMSHGTGTF QRTFLRYEPL PAHLVDKVAG
|
|---|
| |