Gene Sros_6116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6116 
Symbol 
ID8669414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6708530 
End bp6709282 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003341590 
Protein GI271967394 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.701892 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.165467 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGCC ACTCCAAATG GGCGACGACG AAGCACAAGA AGGCCGCGCT CGACTCCAAG 
CGCGGCAAGC TGTTCGCCAA GCTCATCAAG AACATCGAGG TCGCGGCCCG GACCGGCGGC
CCGGACCCGG ACGGCAACCC GACGCTGTAC GACGCCATCA CCAAGGCGCG CAAGAGCTCG
GTCCCGATCG ACAACATCGA GCGCGCCCGC AAGCGCGGCG GTGGCCTGGA GGCCGGCGGC
GCCGACTGGC AGACCATCAT GTACGAGGGC TACGCCCCGG GCGGCGTGGC GGTGCTGATC
GAGTGCCTCA CCGACAACCG CAACCGTGCG GCCTCCGAGG TCCGCGTCGC CCTGACCCGC
AACGGCGGCT CCCTGGCCGA CCCCGGCTCG GTCTCCTACA TGTTCAACCG CAAGGGCGTC
GTGCTCGTCC CCAAGGGTGA GCTGTCCGAG GACGACGTGC TGACCGCGGT CCTCGACGCG
GGCGCCGAGG AGGTCAACGA CCTGGGCGAC CAGTTCGAGG TCGTCTCCGA GGCCACCGAC
CTCGTCCCGG TCCGCAAGGC CCTGCAGGAG GCCGGGATCG ACTACGACTC GGCCGAGTCC
AGCTTCCTGC CGACGATGAA CGTCCCGCTC GACGAGGACG GCGCCCGCAA GGTCTTCCGG
CTGATCGACG CCCTTGAGGA CAGCGACGAC GTCCAGAACG TCTGGGCCAA CTTCGACGTG
TCCGACGAGG TTCTGGAGAA GCTCGACGCC TGA
 
Protein sequence
MSGHSKWATT KHKKAALDSK RGKLFAKLIK NIEVAARTGG PDPDGNPTLY DAITKARKSS 
VPIDNIERAR KRGGGLEAGG ADWQTIMYEG YAPGGVAVLI ECLTDNRNRA ASEVRVALTR
NGGSLADPGS VSYMFNRKGV VLVPKGELSE DDVLTAVLDA GAEEVNDLGD QFEVVSEATD
LVPVRKALQE AGIDYDSAES SFLPTMNVPL DEDGARKVFR LIDALEDSDD VQNVWANFDV
SDEVLEKLDA