Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_6102 |
Symbol | |
ID | 8669400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 6692464 |
End bp | 6693729 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | Histidine--tRNA ligase |
Protein accession | YP_003341576 |
Protein GI | 271967380 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.998614 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTTGC AGGCGCCGAA GGGCACCTTT GACTGGCTCC CGCCGCGTTC GGAGCAGGCG CTCGCCGTGC GGGAGGCGCT GACCGCCCCG GTCCGCCGCG CGGGGTACGG CTACATCGAG ACGCCGGTCT TCGAGGACAC CGCGCTGTTC GTCCGCGGTG TCGGCGAGTC GACCGACATC GTCTCCAAGG AGATGTACAC CTTCGAGGAC AAGGGCGGGC GCTCGCTCAC GCTGCGCCCC GAGGGCACCG CGTCGGTCGT GCGCTCGGTC CTCCAGCACG GCCTGCACAA CGGCCAGCTC CCGGTGAAGC TCTGGTACTC CGGCAGCCAG TTCCGCTACG AGCGCGCGCA GAAGGGCCGC TACCGCCACT TCTGGCAGAT CGGCGCCGAG GCCCTGGGAG CCGAGGACCC CGCGCTGGAC GCCGAGCTGA TCGTGCTGGC CGCCGACGGC TACGCCGGGC TGGGCCTCAC CGGCGTGCGG CTGCTGCTCA ACACGCTGGG CGACAAGGAG TGCCGTCCCG GCTACCGGAC GGCGCTGCAG GACTTCCTGC GCGCCCTCGA CCTCGACGAG CCCACCCGGC AGCGGATCGA GATCAATCCG TTGCGCGTCC TCGACGACAA GCGCCCCGAG GTGCAGGCCC AGCTCGCCGG CGCCCCGCTG GTCGTCGACC ACCTGTGCGA GGCCTGCAAG GCCTACCACG AGGAGGTCCG CTCGCTGCTG ACCGCCGCCG GCGTGGCCTA CACCGACGAC CCCCGGCTGG TCCGCGGTCT CGACTACTAC ACGCGCACCA CCTTCGAGTT CGTCCACGAC GGGCTGGGCT CGCAGTCGGC GGTCGGCGGC GGCGGCCGCT ACGACGGGCT GAGCGAGATG CTCGGCGGCC CCGCCCTGCC CAGCGTCGGC TGGGCGCTCG GCGTCGACCG GACGCTCCTG GCAATGGAGG CCGAGGGGCT GGCCGGTGCC GAGACCGCCG AGTCGCGTGT CCAGGTGTAC GGTGTGCCGC TGGGTGAGGA GGCGCGCCGC CGGATGTTCC TGCTCATGAC CGAGCTGCGC CGGGCCGGTC TCGACGCCGA CATGTCGTTC GGCGGCAAGG GCGTCAAGGG TGCCATGAAG GGCGCCGACC GGTCGGGTGC GAGCTATGCC GTGATCCTCG GCGAGCGAGA TATCGCCGCC GGGTCCGCGC AGGTCAAGGA CCTGGCCAGC GGTGACCAGA CCGCCGTACC GCTCGCTGAG ATCGTCACGA CCTTGAAGGA GAGACTGAAG AAATGA
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Protein sequence | MTLQAPKGTF DWLPPRSEQA LAVREALTAP VRRAGYGYIE TPVFEDTALF VRGVGESTDI VSKEMYTFED KGGRSLTLRP EGTASVVRSV LQHGLHNGQL PVKLWYSGSQ FRYERAQKGR YRHFWQIGAE ALGAEDPALD AELIVLAADG YAGLGLTGVR LLLNTLGDKE CRPGYRTALQ DFLRALDLDE PTRQRIEINP LRVLDDKRPE VQAQLAGAPL VVDHLCEACK AYHEEVRSLL TAAGVAYTDD PRLVRGLDYY TRTTFEFVHD GLGSQSAVGG GGRYDGLSEM LGGPALPSVG WALGVDRTLL AMEAEGLAGA ETAESRVQVY GVPLGEEARR RMFLLMTELR RAGLDADMSF GGKGVKGAMK GADRSGASYA VILGERDIAA GSAQVKDLAS GDQTAVPLAE IVTTLKERLK K
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