Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_6094 |
Symbol | |
ID | 8669392 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 6682770 |
End bp | 6685442 |
Gene Length | 2673 bp |
Protein Length | 890 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | Alanine--tRNA ligase |
Protein accession | YP_003341568 |
Protein GI | 271967372 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0138717 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTCGG CAGAGATCGC CCGCCGCTTC CTGCGCTTCT TCGAGGAGCG TGGGCACACC GTCGTGCCCT CGGCCAGCCT GATCGCCGAG GACCCGACGC TGCTTCTGGT CCCCGCGGGC ATGGTGCCGT TCAAGCCCTA CTTCCTGGGA CAGCAGAAGC CGCCCTTCAA CCGGGCCACC AGCGTCCAGA AGTGCGTGCG CACCCCCGAC ATCGACGAGG TCGGCAAGAC CACCAGGCAC GCCACGTTCT TCCAGATGCT CGGCAACTTC TCCTTCGGCG ACTACTTCAA GGAGCAGGCG ATCCCGCTCG CCTGGGAGCT GCTGACCAAG CCCGAGTCCG AGGGCGGTTT CGGCTTCCCC CAGGAGCGGC TCTGGGTCAC CGTCTACCAG GACGACGACG AGGCCTACGG CATCTGGCAC GACAAGGTCG GCGTCCCGTC CGAGCGCATC CAGCGCCGCG GCCTGGAGGA CAACTACTGG CACATGGGCG TCCCGGGCCC CGGCGGCCCG TGCTCGGAGA TCTACTACGA CCGCGGCCCC GAGTACGGCA GGGACGGCGG GCCCGTCGCC GACGAGAACC GCTACCTCGA GGTGTGGAAC AACGTCTTCA TGCAGTTCCA GCTCAGTGCG GTCCGCAGCA AGGTGGACTT CGACGTCGCG GGCGAACTGC CCGCCAGGAG CGTCGACACC GGCATGGGCC TGGAGCGCAT GGCGGCGATC CTGCAAGGCG TCGACAACAT CTACGAGATC GACACCACCT ACAAGATCCT CGACCGGGCC GCCGAGCTCA CCAAGACGCG CTACGGCCGC GACGAGCGCG CCGACGTCTC GCTGCGGGTC ATCGCCGACC ACGTCCGGAC CGGCGTGATG CTCGTCGCCG ACGGCGTGCT GCCCTCCAAC GAGGGGCGGG GCTACGTCCT GCGCCGCATC CTGCGCCGGG CCATCCGCAA CCTGCGCCTG CTGGGCGCGG GCGAGGAGCG CTACATGCAC GAGCTCACCG CGGTGACCAT CGACGTGATG GGCGAGCAGT ACCCCGAGCT CAAGGCCGAC GCCCCGCAGA TCCACGGCGT CATCGACGCC GAGGAGGCCT CGTTCCTGGG CACCCTCCGC ACCGGCACCG CGATCTTCGA CGTCGCCGTG GAGGAGACCA GGCGCAAGGG GAAGGGCACC CTCGCCGGGG AGCAGGCCTT CCAGCTCCAC GACACCTACG GCTTCCCGAT CGACCTGACC CTGGAGATGG CCTCCGAGCA GGGGCTCAAG GTCGACGAAG AGGGCTTCCG CCGGTTGATG AAGGAGCAGC GCGACCGGGC CAAGGCCGAC GCCGCCGCCA AGAAGACCGG CAACGCCGAC ATCTCGGTGT TCGGCCAGAT CCTTGAGAAG ACCGGCCGGG TGGAGTTCCT GGGCTACGAC CAGGTGACCG CCGAGGCCGA GGTCATCGGC CTGCTCGTCG GCGGGGCCCC GGTCCCGGCC GCGGGCGCCG GCACCGAGGT CGAGGTCGTG CTGGGCCGTA CCCCCTTCTA CGCCGAGGGC GGCGGCCAGC TCGCCGACCA GGGCGTCATC CGCACCGACG GGGCCGAGGT CGAGATCGTG GACGTGCAGT CCCCGGTCTC CGGCGTCGTC GTCCACCGCG GGAAGGTCCG CGCCGGCGAG ATCCGGGTGG GCGACCAGGC CCAGGCCGAG ATCGACGTCG AGCGGCGCCG CGCCATCTCC CGCAGCCACA CCGCCACCCA CCTGGTGCAC CGCGGCTTCC GCAACGCGCT GGGCGAGACG GCGGCGCAGG CCGGTTCGGA GAACTCGCCC GGTCGCTTCC GCTTCGACTT CACCGCCGCC GGCGCCGTGG CGCCCAGCAT GCTCCGCGAC GTCGAGGACG AGGTCAACGC CGTCCTGATC AACGACCTCA CGGTCAACGC CTTCCACACC TCCCAGGCCG AGGCGCGGGC GATGGGCGCG CTGGCCCTGT TCGGCGAGAA GTACGGCGAG ACCGTCCGCA TCGTCGAGGT CGGCGACTAC TCCCGCGAGC TCTGCGGCGG CACCCACGTC TCCAGCTCCG GCCAGCTCGG TCTGGTCAAG GTGCTGGGCG AGGCCTCGAT CGGCGCCGGG GTGCGCCGGG TGGAGGCTCT GGTCGGCCTG GACGCCTTCC GCTTCCTGGC CCGCGAGAGC GTGCTCGTCG CCCAGCTGTC GGAGCAGCTC AAGGCGCGCC GCGAGGAGCT GCCGGAGCGG ATCGACGGCA TCGTGACCCG GCTGCGCGCC GCGGAGAAGG AGCTGGACAA GCTCCGTTCC GCCCAGGTGC TCGCGATGGC GGGCGAAATG GCCGCCGGTG CCCGTGACCT GCACGGAGTC TCTGTCGTGA CGCGCCGCGC GCCTGATGGA ACCTCCCCCG ACGACCTGCG TAAGCTCGCC CTTGACGTGC GTGGCCGGTT CACGGGTGAG CAGCCCGCGG TCGTCGTCGT GGCCGGTGTC CCCAGCGACC GGCCCGTCGT CGTCGCCGTG GTCAACGACG CGGGGCGCGG ACGGGGCCTG AAGGCGGGGC AGCTCGTCGG CGTCGCCGCC AAGGCGCTCG GCGGTGGCGG TGGCGGTAAG GATGACGTCG CCCAGGGCGG TGGAGCCCGT CCTGAGGCGA TCGACGACGC GCTTGTCGCC GTCGAGCAGG CGATCGCGCA GACGGTCGTC TGA
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Protein sequence | MESAEIARRF LRFFEERGHT VVPSASLIAE DPTLLLVPAG MVPFKPYFLG QQKPPFNRAT SVQKCVRTPD IDEVGKTTRH ATFFQMLGNF SFGDYFKEQA IPLAWELLTK PESEGGFGFP QERLWVTVYQ DDDEAYGIWH DKVGVPSERI QRRGLEDNYW HMGVPGPGGP CSEIYYDRGP EYGRDGGPVA DENRYLEVWN NVFMQFQLSA VRSKVDFDVA GELPARSVDT GMGLERMAAI LQGVDNIYEI DTTYKILDRA AELTKTRYGR DERADVSLRV IADHVRTGVM LVADGVLPSN EGRGYVLRRI LRRAIRNLRL LGAGEERYMH ELTAVTIDVM GEQYPELKAD APQIHGVIDA EEASFLGTLR TGTAIFDVAV EETRRKGKGT LAGEQAFQLH DTYGFPIDLT LEMASEQGLK VDEEGFRRLM KEQRDRAKAD AAAKKTGNAD ISVFGQILEK TGRVEFLGYD QVTAEAEVIG LLVGGAPVPA AGAGTEVEVV LGRTPFYAEG GGQLADQGVI RTDGAEVEIV DVQSPVSGVV VHRGKVRAGE IRVGDQAQAE IDVERRRAIS RSHTATHLVH RGFRNALGET AAQAGSENSP GRFRFDFTAA GAVAPSMLRD VEDEVNAVLI NDLTVNAFHT SQAEARAMGA LALFGEKYGE TVRIVEVGDY SRELCGGTHV SSSGQLGLVK VLGEASIGAG VRRVEALVGL DAFRFLARES VLVAQLSEQL KARREELPER IDGIVTRLRA AEKELDKLRS AQVLAMAGEM AAGARDLHGV SVVTRRAPDG TSPDDLRKLA LDVRGRFTGE QPAVVVVAGV PSDRPVVVAV VNDAGRGRGL KAGQLVGVAA KALGGGGGGK DDVAQGGGAR PEAIDDALVA VEQAIAQTVV
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