Gene Sros_6079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_6079 
Symbol 
ID8669377 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6669349 
End bp6670611 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003341554 
Protein GI271967358 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.533874 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTGG GCCCCCTGCG CGACTCCCGC GACTTCCGGC TGCTCTTCGG CTCGGGAATG 
ATCACGATGT TCGGCACCTT TCTCACGCTG GTCGCGGTCC CGCTGCAGAT GAAGGAGCTC
ACCCACGGCT CCTACCTGGC GGTCGGCCTG GTCAGCGTGG CGGAATTCGT GCCGATGGTG
GTGTGCGGGC TCTGGGGCGG GGCGATCGCG GACGCGCTCG ACCGGCGGAA GATCATCCTC
TACACCGAGG TGGGGCTCTG CGTCACGGTC GTGGCCCTGA TGGTCAACGC GATGCTGCCG
GAGCCGCAGA TCTGGGTGCT GTACGTGGTC GGCGCGCTCT CCGCCGGCCT CGGCAGCCTG
CAGCGGCCGA GCCTGGAGTC GCTGATGCCG CGCGTGGTCA GGCACGACCA GCTCACCGCG
GCCGCCGCGC TGACCAGCTT CCGCTGGAAC CTCGGCGCCA TCGTGGCCCC CGGTCTCAGC
GGCCTGATCG TCATCTGGTT CGGCTTCGCC GCCGCCTACG GCATCAACGT GGCGACCTTC
CTGTTCTCCC TGGCCCTGCT CTGGCTGGTG AAGGCCCCGC CGCAGTCCGA GGACGCTCCC
CCGGCGTCGA TCAGGGCGCT GGTCGAGGGC GTCCGCTACG CCGTGGGCCG CACGGACCTG
ATGGGCACCT ACCTGGTGGA CATCGCCGCG ATGGTCTTCG CGTTCTCCAC CGCGCTGTAC
CCCTTCCTCG CCGACGAGCT CGGCGTCCCC GAGGCTCAGG GCCTGTTCTT CTCCGCCTCG
GCCGTCGGCT CGCTGATCGC CTCGGTCACC TCCGGCTGGA CCAGCCACGT CCACCGCCAC
GGCCTGGGCG TCGTCGTGGC GGCGATCGGG TGGGGCGCCG CGGTGGCGCT GGCGGCCGTC
ATGCCCACCG TCTGGGGCAT CTTCGCCTGC CTGGCCCTGG CCGGGGCGGC CGACATGATC
AGCGGTGTCT TCCGCTCCAC CATCTGGAAC CAGACCATCC CGGACGAGTT CCGTGGCCGT
CTGGCAGGCA TCGAGCTGCT CTCCTACACC AGCGGCCCGA TGCTGGGCAA CGCCAGGGCG
AGCCTGATGG GCCAGCTCGG CGGGACCCGC TTCTCCCTGG GCGCGGGCGG CCTGCTGTGC
GTCGGCGCGG TGGTCGCGAT GGCCGGGCTG CTGCCCAGGT TCCGCGACTA CGACGCCCGC
ACCGACGAGC ACGCGGTCCG GGAGCGTGCC CGCCGCGAGG CCCACGCGGG GGCCGAGACC
TGA
 
Protein sequence
MDLGPLRDSR DFRLLFGSGM ITMFGTFLTL VAVPLQMKEL THGSYLAVGL VSVAEFVPMV 
VCGLWGGAIA DALDRRKIIL YTEVGLCVTV VALMVNAMLP EPQIWVLYVV GALSAGLGSL
QRPSLESLMP RVVRHDQLTA AAALTSFRWN LGAIVAPGLS GLIVIWFGFA AAYGINVATF
LFSLALLWLV KAPPQSEDAP PASIRALVEG VRYAVGRTDL MGTYLVDIAA MVFAFSTALY
PFLADELGVP EAQGLFFSAS AVGSLIASVT SGWTSHVHRH GLGVVVAAIG WGAAVALAAV
MPTVWGIFAC LALAGAADMI SGVFRSTIWN QTIPDEFRGR LAGIELLSYT SGPMLGNARA
SLMGQLGGTR FSLGAGGLLC VGAVVAMAGL LPRFRDYDAR TDEHAVRERA RREAHAGAET