Gene Sros_5916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5916 
Symbol 
ID8669210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6485542 
End bp6486198 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content74% 
IMG OID 
ProductHAD family hydrolase 
Protein accessionYP_003341394 
Protein GI271967198 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0345843 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0351614 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCGG TCCTGTTCGA CATGGACGGG CTTCTCGTGG ACAGCGAGAA GATCTGGTTC 
CAGGTCGAGT CCGAGGTGAT GGAACGGCTC GGCGGCCACT GGGGGGCCGC CGACCAGGAG
CACCTGGTGG GCGGCTCCAT GCCGTCCACC GTCGCCTACA TGCTCAAGGC CTCCGGCTCC
AGCGCCCATC CGGACGACGT GGCGGCCTGG ATGCTGGAGG GCATGACCCG CCGGCTCGCC
GACGGCGTGG AGATGATGCC CGGCGCCGCC GAGCTGCTGG CGGCGGTACG GCGGGCGGGC
CTGCCCACCG CCCTGGTGAC CTCCTCGGTG CGGCCGATCG CCGAGGCGTG CCTGAAGGGC
ATCGGCAGGG GCAACTTCGA CCACGTGGTG ACCGGCGACG ACGTGATGCG GACCAAGCCC
CATCCGGAGC CCTACCTGAC GGCCGCCCGG CTGCTGGACG TGGCCGCGGC CCGCTGCGTC
GCGCTGGAGG ACTCCCCGAA CGGGGTGACC GCGGCCACCG CGGCCGGCTG CCGGGTGGTG
GCCGTGCCGA GCGTGCTGCC GATCCCCTCC GCCCCCGGCC GCCTCGTCGT GGACTCCCTG
CGCGAGGTCG ACGTCGACGT CCTCCGGGCG CTGTCGGCCC GCGGCGGAGA CCGCTGA
 
Protein sequence
MDAVLFDMDG LLVDSEKIWF QVESEVMERL GGHWGAADQE HLVGGSMPST VAYMLKASGS 
SAHPDDVAAW MLEGMTRRLA DGVEMMPGAA ELLAAVRRAG LPTALVTSSV RPIAEACLKG
IGRGNFDHVV TGDDVMRTKP HPEPYLTAAR LLDVAAARCV ALEDSPNGVT AATAAGCRVV
AVPSVLPIPS APGRLVVDSL REVDVDVLRA LSARGGDR