Gene Sros_5852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5852 
Symbol 
ID8669146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6414723 
End bp6415997 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content73% 
IMG OID 
ProductSerine phosphatase RsbU regulator of sigma subunit-like protein 
Protein accessionYP_003341330 
Protein GI271967134 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.910285 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.678328 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGGCG TAGTGGGCGG CCACCAGCCA CCCCTCCCCC CACGAAACGA CCTCGTGACC 
GGTTCCGCCC CGCTGACCGC GGCAGAGATG GTGCAGCGGT TGCGCGGAGA GCTGGACGAG
CACATGGCCG TGGAACGACA ACTCCTCACC GCACGGCTGG CGCACGCCGA GCGGATGGGC
AACCTGGGCT GGGCCGAATG GAACCTCCAT ACCGGAGAGT CCGTCTGGTC CGATCGCGCC
TACGCCATCT TCGGCCGCGA TCCCGGCGAG GGGCCCATCC ACCTGCGCGA CCTGGTCGCC
TACGTCGAGG CCGTGGACCA GGCCGACCTG GACCGGCTGC TGCGGGCCGT CGTGCACGGC
GCCGAGTCCG GGCAGGCCGA GTTCCGCATC CGCCGCCAAG GAGAGGTCCG CAACCTGCGC
GCGGCCCTCG AACCCGTCGC GACCGGCGGG CGCACCGCCG TGCACGGGGT GATCCAGGAC
ATCACCGGCC GGCGCCGGGC CGAGCGGATC ATGTCGGAGT CCCGGCGCCA GCTCCTGGAG
GTCCGCGAGC AGGCCGCCGA GGAACGGCAC CTCAGCGTGG CCCTGCGGGA CGCGATCATG
CCCGACCTCG GGGCCGCCGT CGAGCTGCCC CACGCGCGGA TCGAGGTCCG CTACGTCCCG
GCGGGCATGC GGGCGGGCCT CGGCGGCGAC TGGTACGACG CCAGCCCCCT GCCCGACGGC
CGGGTGCTGC TGACCATCGG CGACGTGTCC GGGCACGGCC TGCCCGCGAT CGCCCAGATG
GCCCGGCTGC GGCACTCGCT GATCGGGCTG GCGATGACCG GCGAGCCGGC GGACAAGCTG
CTGAACTGGC TCAACACGCT GGTGATGCAC CGGCTGGCGG AGACCACCGC GACCGCGGTG
ATCGGCCATC TCGACCCCTC CACCCGCGTG TTCACCTGGA GTCAGGCCGG CCACCCCGCG
CCGATCCTGA TCCGTGACGG GGTGGCCGTC CAGCTCGATC CGCCCGCCGG AGTGCTGCTC
GGCGCCACGC TCACCGTGCC GTACGAACCG GCCAGCGTGA AGCTGCTGGA GGGAGACCTG
CTGCTGCTGT TCACCGACGG GCTGGTCGAG CGGCGCTCCC GTGACATCGA CGAGGGGCTC
GCGCTGGCCC TGGCGGCGGC GGCGGACCTC ACCGGAGACG ACCTGGAGGC CGGGCTGGAC
CGGCTGATCC AGGCGGTCGG CGGCCCGAAC CCCGAAGACG ACACGTGCGT GCTGGCGATC
GGCGTGCTTG GTTAA
 
Protein sequence
MVGVVGGHQP PLPPRNDLVT GSAPLTAAEM VQRLRGELDE HMAVERQLLT ARLAHAERMG 
NLGWAEWNLH TGESVWSDRA YAIFGRDPGE GPIHLRDLVA YVEAVDQADL DRLLRAVVHG
AESGQAEFRI RRQGEVRNLR AALEPVATGG RTAVHGVIQD ITGRRRAERI MSESRRQLLE
VREQAAEERH LSVALRDAIM PDLGAAVELP HARIEVRYVP AGMRAGLGGD WYDASPLPDG
RVLLTIGDVS GHGLPAIAQM ARLRHSLIGL AMTGEPADKL LNWLNTLVMH RLAETTATAV
IGHLDPSTRV FTWSQAGHPA PILIRDGVAV QLDPPAGVLL GATLTVPYEP ASVKLLEGDL
LLLFTDGLVE RRSRDIDEGL ALALAAAADL TGDDLEAGLD RLIQAVGGPN PEDDTCVLAI
GVLG