| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5608 |
|---|
| Symbol | |
|---|
| ID | 8668902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 6142158 |
|---|
| End bp | 6143693 |
|---|
| Gene Length | 1536 bp |
|---|
| Protein Length | 511 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003341103 |
|---|
| Protein GI | 271966907 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.30311 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.250763 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCT CCAAGCGGCG TCCCGCCGCG TTCCAGCAGG ACCTGCGGCT CGTCCGCACC
GACGACAGCT GGCTCCACCT GCCCAACCGG TGGGGCATCC CCGTGGACGT CTGCGCCGGG
GCCGACGTGC CGATCGAGTC CAGCGCGATC GACGAGATCC TCACCGTGCT CGCCACCGCC
GACACCCTGG AGCGGTTGGG CGCGGTGACC GGGCACACCG AAGCGGCGAT CAGCCGGGTC
GTGCTGACCC CCGACCTCCA CAAGGGGGCC GGGATCCCGA TCGGCACGGT GCTGCAGACG
CGCGGCGCGC TGCTCCCCCA GGCGGTCGGC AACGACATCA ACTGCGGTAT GCGGCTGGAG
ACGACGTCGC TGACCGCCGA CCAGGTACGC CCGCGGCTGG ACGCGCTGGA ACGCCGGCTA
CGGCACCTGT TCTTCGAGGG CGGCCGGCGC ATCGCGCTGT CCGGTCTCCA GCGAGAGGCG
CTGCTCCGCG ACGGCCTGCC GGGGCTGCTC GGCACCGGCA GGCCGGAGCG GGCGGACGGG
GTGTGGTCGG CGCTGCGGCC CGGCGACGCC CGGCCCGGCC GGATCCACGG ATCGCAGTAC
CCGACCACGA ACGCCGACGC CTTCCGGGAC TGGATCCACA GCGCGGGCGG CACGAGCTTC
GACAGCATCA TCGGCAGCGT CGGCGGCGGC AACCATTTCG CGGAGCTGCA GTACGTGTCG
GCGATCCATG ACCGGCAGGC CGCCCACGGG TGGGGCTTCA GTCTCGGCCA GGTGGTGCTG
ATGGTGCACA GCGGCTCCCT GTCGCTGGGA CATCAGGCCA ACGCGTCCGG GCTGGACCAG
GCCAGAGCCG CATGGCCCGC AGGCGTCCCC CTGCCGGACA ACAGGATCAT CCCCATGATG
ACGGACGGAC GGTCCGCGCC GGCGCGGCGG CGCTACCTGG ACGCGTTCGG CAACGCGGCG
AACTTCGCGG TGGGCAACCG GTTCTTCCTG TCGCTGATGC TGCGCGCCGG GCTGGCCGCC
GAGTGCGGGG AACTCGCCGC CGACCTCGTG TACGACGCCC CGCACAACCT GCTGTGGCAG
CACGACGACG GACAGGTCGT GCACCGCAAG GGCGCGACGC CGGCGGGCGG ATACGCCGAG
ACGGCGGGCG GGCCGTACGC GATGTGGGGC GAGCCCGTCA TCGTACCGGG CTCGATGGGG
GCCGCCAGTT ACGTGCTGCG CGGTCACGGC AACCCCCGGA CCCTGGCGAG TGCCTGCCAC
GGGGCCGGTC GCCGCGTGCG CCGGGGCGCC GCCGCCCAGG CGGGCGAAGC CGAGCTGGAC
GCCTTCCTTC GCGACTTCCG GGTGGTCACC CCCCTGGACC ACCGTGACCC GGCCGTCAAC
CGCCGCTCCG ACGTGATGGC CGCGTGGCGC CGCGACCTCA AGCAGGAGGC CCCCTGGGTG
TACAAGGACA TCGGCCCCGT CGTCTCAAGT CTCCGCAGGG CCGGGGTCGC CGAACCCGTC
GTCGAGCTGC GACCGCTGCT GACCGTCAAG GGGTGA
|
|---|
| Protein sequence | MTTSKRRPAA FQQDLRLVRT DDSWLHLPNR WGIPVDVCAG ADVPIESSAI DEILTVLATA
DTLERLGAVT GHTEAAISRV VLTPDLHKGA GIPIGTVLQT RGALLPQAVG NDINCGMRLE
TTSLTADQVR PRLDALERRL RHLFFEGGRR IALSGLQREA LLRDGLPGLL GTGRPERADG
VWSALRPGDA RPGRIHGSQY PTTNADAFRD WIHSAGGTSF DSIIGSVGGG NHFAELQYVS
AIHDRQAAHG WGFSLGQVVL MVHSGSLSLG HQANASGLDQ ARAAWPAGVP LPDNRIIPMM
TDGRSAPARR RYLDAFGNAA NFAVGNRFFL SLMLRAGLAA ECGELAADLV YDAPHNLLWQ
HDDGQVVHRK GATPAGGYAE TAGGPYAMWG EPVIVPGSMG AASYVLRGHG NPRTLASACH
GAGRRVRRGA AAQAGEAELD AFLRDFRVVT PLDHRDPAVN RRSDVMAAWR RDLKQEAPWV
YKDIGPVVSS LRRAGVAEPV VELRPLLTVK G
|
|---|
| |