Gene Sros_5594 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5594 
Symbol 
ID8668888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6128304 
End bp6129449 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content71% 
IMG OID 
Productputative transposase, IS891/IS1136/IS1341 
Protein accessionYP_003341089 
Protein GI271966893 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0815398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.455176 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTGCG CCATGGCGCA GCGTGTGAAG CGGGCCTTCA CCTACCGCTT CTATCCGACC 
CCCGAGCAGG CCGAGCAGCT TGCCCGGACC TTCGGCTGCG TCCGCCTGGT CTACAACAAG
GCGCTGGAGG AGCGCAGCCG CGCCTACGCC CTTCACGGAC GCGGTGTCTC CTACGGGGAG
TCGTCGGCGA TGCTGGCCGC GTGGAAGCGC ACCCAGGAGC TGGCGTTCCT GGGGGAGGTG
TCGTCGGTGC CGTTGCAGCA GGCCCTGCGC CACCTGCAGG CGGCGTTCAC CAACTTCTTC
GCCAAACGGG CCGCCTATCC GCGGTTCAAG TCCAGGAAGA GGTCCCGGCT GTCGGCTGAG
TACACCCGCT CGGCGTTCAC CTGGCGCGAC GGGCGGCTGA CCCTGGCGAA GACGGGCACC
CCGCTGCGCA TCGTGTGGTC GCGGCCGCTG CCCGAGGGGG CGGAGCCGTC CACGGTGACG
GTGAGCAGGA ACGCGGCCGG GCGGTGGTTC GTGTCGATCC TGTGTGAGGA CACGGTCCGC
CCGCTGGACC CGGTGGAGGG TGTGGTGGGC ATCGACGCCG GGATCGCGTC CCTGCTCGTC
TTGTCGCGGC CGATCCCCGG CGTCACCGAC GCCGTCGGCA AGGTCGCCAA TCCCCGCCAC
GAGCGGGCCG ACCGCGTCCG GCTGGCCCGC GCGCAGCGCG CCCTGGCCCG CAAGGAGAAG
GGCTCCAGCA ATCGGGCCAA GGCGAAGGTG CGGGTCGCGC GGGTGCACGC CCGGATCACC
GACCGCAGGC GTGACCACCT GCACAAGCTC ACCACCTCGA TCGTCCGCGA GAACCAAGTG
ATCGCGATCG AGGACCTCAC CGTCCGCAAC CTGGTGAGGA ACCGCCGCCT GGCCCGCGCC
GTCTCGGACG CCTCCTGGCG GCAGGTGCGG ACCATGCTGG AGTACAAAGC GGCCTGGTAC
GGCCGGGAAC TGGTGGTCGT CGACCGCTGG TTTCCCTCCT CCAAGCTCTG CTCGGCGTGC
GGCGCGGTCG CTGCGGCCAT GCCGTTGGAG GTGCGGGAGT GGGTGTGCGC GGCTTGTGGC
GCGACCCATG ATCGGGATGT GAACGCCGCG AAGAACATTC TCGCCGCCGG GCTGGCGGAG
AGGTGA
 
Protein sequence
MMCAMAQRVK RAFTYRFYPT PEQAEQLART FGCVRLVYNK ALEERSRAYA LHGRGVSYGE 
SSAMLAAWKR TQELAFLGEV SSVPLQQALR HLQAAFTNFF AKRAAYPRFK SRKRSRLSAE
YTRSAFTWRD GRLTLAKTGT PLRIVWSRPL PEGAEPSTVT VSRNAAGRWF VSILCEDTVR
PLDPVEGVVG IDAGIASLLV LSRPIPGVTD AVGKVANPRH ERADRVRLAR AQRALARKEK
GSSNRAKAKV RVARVHARIT DRRRDHLHKL TTSIVRENQV IAIEDLTVRN LVRNRRLARA
VSDASWRQVR TMLEYKAAWY GRELVVVDRW FPSSKLCSAC GAVAAAMPLE VREWVCAACG
ATHDRDVNAA KNILAAGLAE R