Gene Sros_5580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5580 
Symbol 
ID8668874 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6102373 
End bp6102894 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content73% 
IMG OID 
ProductPEBP family protein 
Protein accessionYP_003341075 
Protein GI271966879 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.759464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGATC AGCGCGCACC GCTGCCCTAC ACCTACCTGC GCCAGGTTCC GGCGTTCACG 
GTCGCCAGCG ACGACCTCGT GGACGGCGGC GTCCTGCCCG GCGCGCACGT CTACGAGTCC
GGCAACATCT CCCCGCACCT GCGCTGGTCG GGTGCTCCGG AGGGGACGGA GGGCTACGCG
GTCACCTGCT TCGACCCCGA CGCCCCCACC GGCAGCGGCT GGTGGCACTG GCTGCTGGTC
GACATCCCGG CCGAGGTGGG CGAGCTGCCG CGCGGAGCCG GCAGCGGTGC GATGGAGGGG
CTGCCCAAGG GGGCCTTCCA CGGCCGCAAC GACTACGGCA CGTTCGACTT CGGCGGGGCC
GCCCCGCCTC CCGGGCCGCC CCACCGTTAC GTTTTCGCGG TCCACGCCCT CGGCGTGGAG
AGCATCGAGG TCACCCCGGA GCAGACGGCC GCCGTCTTCG GCGGGACCGT CAACCACCAC
GCCCTGGCCC GCGCGGTGCT CACGGTGGAG TACGGCGTCT GA
 
Protein sequence
MMDQRAPLPY TYLRQVPAFT VASDDLVDGG VLPGAHVYES GNISPHLRWS GAPEGTEGYA 
VTCFDPDAPT GSGWWHWLLV DIPAEVGELP RGAGSGAMEG LPKGAFHGRN DYGTFDFGGA
APPPGPPHRY VFAVHALGVE SIEVTPEQTA AVFGGTVNHH ALARAVLTVE YGV