Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5579 |
Symbol | |
ID | 8668873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 6100824 |
End bp | 6102179 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | diaminopimelate decarboxylase |
Protein accession | YP_003341074 |
Protein GI | 271966878 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.485519 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGCGA GTCTCAGCGT CGAAATCTTC GATGCTGAGA CCGGACAAAA GCCATCAAGC TCTACCTTCA ACCCCATGAG CTTGGTCATC GAGAACGGCT GGCCGCGCAC CGCGGCATGG ACCGGCGGGG AACTGCACAT CGGCGGGATC GGCGTACGGG AGCTCGCCGC CGAGTTCGGC ACGCCCGCCT ACCTCCTCGA CGAGGAGGAG TTCCAGGCAC GGTGCGCGGA GTGGCGGGAC GCGCTGCCCG ACGGTGAGGT CCACTACGGA GGCAAGGCCT TCCTCTGCCC CGAGGTGGTG CGCTGGCTGG ACGCGGCCGG CCTCTGCCTC GACGTGTGCA CCGGGGGCGA GCTGGCCGTG GCCGTGGCCG GGGGGATGGA TCCCGCGCGG GTGGTCTTCC ACGGCAACAA CAAGTCGTTC GCCGAGCTGC GCCGGGCCGT CACCTGGGGC GTCGGCTGCG TGGTCGTGGA CTCCTTCGCC GAGATCGAGC GGCTGGCCCT CCTCGCGGGC GAGGCGGGGG TGCGGCAGCG CGTGATGATC CGGGTCACCC CGGGGGTGGA GGCGCACACC CACGAGTTCA TCGCCACCGG CGGCGACGAC TCGAAGTTCG GGTTCTCGCT GAACGCCGGG CTGGCGGCCG AGGCGGTCCG CCGGGTCCTG GCCGCCGCCT CGCTGGAGCT GACCGGACTG CACTCCCACA TCGGCTCGCA GATCACCGAT CTGGGCGGCT TCACCCTGGC CGCCCGCCGG ATGGCCGCCT TCCTGCTGGC GTGCGAGCGC GAGCACGGCG TGACGATCCC CAAGCTCGAC CTCGGCGGCG GCCTGGGCAT CGTCTACCGG CCCGGCGACC CGGTGCCGCC GCGCCCGGCC GAGGTGGTCG CGGCCCTGCG CGAGGCCGTC CCGGCCCACC TGCGGCTCGC CGTGGAACCG GGCCGCTCGA TCGCCGGGCC CACCGCCGTC GCCCTCTACG AGGTGGGCAC GGTCAAGGAG ATCCCCGGCG TCAACACCTA CGTCAGCGTG GACGGCGGGA TGAGCGACAA CCCCCGTCCC GCCATGTACG GCGCCGCCTA CACCGCGCTC CTGGCCTCCC GCTCCTCGGA CGCCCCCCTC CGCGAGGTGA CGGTGGTCGG CAAACACTGC GAGAGCGGCG ACGTGCTCGT CCGCGACCTG CCGCTGCCCG CCGACGTACG GCCCGGCGAC CTGCTGGCGA TCCCCGCCTC GGGGGCCTAC CAGCGGTCGA TGGCGAGCAA CTACAACCAC GTGACCCGGC CCCCGGTGGT CGCCGTCCGC GACGGATCGG CCCGGGTGGT CGTGCGCCGG GAGACCGAGG AGGACCTGCT CCGCCTCTAC ACCTGA
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Protein sequence | MLASLSVEIF DAETGQKPSS STFNPMSLVI ENGWPRTAAW TGGELHIGGI GVRELAAEFG TPAYLLDEEE FQARCAEWRD ALPDGEVHYG GKAFLCPEVV RWLDAAGLCL DVCTGGELAV AVAGGMDPAR VVFHGNNKSF AELRRAVTWG VGCVVVDSFA EIERLALLAG EAGVRQRVMI RVTPGVEAHT HEFIATGGDD SKFGFSLNAG LAAEAVRRVL AAASLELTGL HSHIGSQITD LGGFTLAARR MAAFLLACER EHGVTIPKLD LGGGLGIVYR PGDPVPPRPA EVVAALREAV PAHLRLAVEP GRSIAGPTAV ALYEVGTVKE IPGVNTYVSV DGGMSDNPRP AMYGAAYTAL LASRSSDAPL REVTVVGKHC ESGDVLVRDL PLPADVRPGD LLAIPASGAY QRSMASNYNH VTRPPVVAVR DGSARVVVRR ETEEDLLRLY T
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