Gene Sros_5577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5577 
Symbol 
ID8668871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6098959 
End bp6099873 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content69% 
IMG OID 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_003341072 
Protein GI271966876 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAAGA CCCCGCAGGC CGCCGACGTC GCGGACCTGC CGATCGACGC GGTCCGCCCG 
CCGCGGCCCG GCCGGTGGGT CGCGGCGGCG GTCGCCGCAT TCGCCCTGGT GTGGCTGGCC
TACACGGTCA TCGTCAACGA GAACCTGCAC TGGGACGTCA TCGCCGAGTA CCTGATGGAC
GGCAGGGTCC TGGGCGGCCT GTGGGTCACG ATCCAGCTCA CCGTGCTGTC CATGGTGATC
GGCCTGGCGC TGGGCATCCT CGCCGCCGTG ATGCAGCTGT CCGGCAGCCC GGTGCTGCGC
GGCGCCTCCG CGCTCTACAC CTGGTTCTTC CGCGGCACCC CGCTGCTGGT CCAGCTCATC
TTCTGGTTCA ACATCGGGCT GGTCTTCCCC TCCTTCGGCA TCGGCGTGCC GTTCGACGGT
CCCAAGCTGA TCGAGTGGCA GGCCAACGAG CTGATCACGC CCTTCACCGC GGCCCTGCTC
GGCCTGGCGA TCAACGAGGG CGCCTACATG GCCGAGATCG TCCGGGCGGG CATCCGCTCG
GTGGACCCCG GCCAGCGCGA GGCGGCCGAG GCGCTCGGCA TGTCACACCG GCAGGTGCTC
CGCCGGGTCG TGCTGCCCCA GGCGATGCGG GTGATCATCC CGCCCACCGG CAACCAGTTC
ATCTCGATGC TCAAGACCAC CTCGATGGTC TCGGTCATCG CCGGCGCCGA GCTGCTGACG
GTCTCCCAGC GCATCTACCT CGGCAACTTC GAGGTGATCG CCATGCTCAT CGTGGCCTCC
ATCTGGTACA TCGTGCTCAC CACCATCGCG AGCGTCGGCC AGCACTTCAT CGAGAAGCGG
TTCGAGCGCG GCCACCACGC GCTGCAGGTC AGGGTCCGCC GCAACCTGCG GCCGTTCGGC
AGGGGGAACG CGTGA
 
Protein sequence
MTKTPQAADV ADLPIDAVRP PRPGRWVAAA VAAFALVWLA YTVIVNENLH WDVIAEYLMD 
GRVLGGLWVT IQLTVLSMVI GLALGILAAV MQLSGSPVLR GASALYTWFF RGTPLLVQLI
FWFNIGLVFP SFGIGVPFDG PKLIEWQANE LITPFTAALL GLAINEGAYM AEIVRAGIRS
VDPGQREAAE ALGMSHRQVL RRVVLPQAMR VIIPPTGNQF ISMLKTTSMV SVIAGAELLT
VSQRIYLGNF EVIAMLIVAS IWYIVLTTIA SVGQHFIEKR FERGHHALQV RVRRNLRPFG
RGNA