Gene Sros_5506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5506 
Symbol 
ID8668800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6024508 
End bp6025305 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content74% 
IMG OID 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_003341005 
Protein GI271966809 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0907707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0753834 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGCGCC GTTATCCCTT CCTCGATCAT CCCGGCCCGC TCGCCTTCGC CCACCGGGGC 
GGGGCGGCCG AGGGCCGGGA GAACACCCAT GCCGCGTTCG CGCGCGCCGT GGAGCTCGGC
TACACCTACC TGGAGACCGA TGCGCACGCC ACCGCCGACG GGGTGCTGCT GGCCTTCCAC
GACCACACCC TCGACCGGGT GACCGACCGG CGCGGCCGGA TCGCCGACCT GCCCTACCGG
GTGGTGCGCG AGGCGCGGAT CGGCGGTGTG GAGGAGATCC CGCTCATGGA CGACCTGCTG
GGCTCCTGGC CGCAGGCGCG CTTCAACATC GACGTCAAGG AGGCCTCGGC CATCGCGCCG
CTGGCCGAGG CGGTCAGGCG GACCAACTCC TACGACAGGA TCTGCCTCAC CTCCTTCTCC
GACGAGCGGC TGACCCGCGC CCGCGCCGCG ATCGGCCGTG AGGTCTGCTC CTCGCTCGGG
CCGCGCGGCG TCGCGGCCCT GCGGGCCGCC GCGGCCACCT CCGGCTACGG CCGCCTGCTC
ACCCGCCTGG CCCGCGCCGG GGTGCCGTGC GCGCAGGTGC CGCTGGGCTT CCGCGGCCTG
CGCGTCACCA CGGCCTCCCT GGTCCGTACG GCACACGCCC TCGGCATGCA GATCCACGTG
TGGACCGTCA ACGACACCCG GGTGATGGAG CGCGTGCTCG ACCTCGGCGT GGACGGCGTG
ATGACCGACA ACATCTCCGG CCTCCGCGAG GTTCTGGAGG CACGCGGCCA GTGGCACCCC
GGCCGGCTCG CCGCGTGA
 
Protein sequence
MQRRYPFLDH PGPLAFAHRG GAAEGRENTH AAFARAVELG YTYLETDAHA TADGVLLAFH 
DHTLDRVTDR RGRIADLPYR VVREARIGGV EEIPLMDDLL GSWPQARFNI DVKEASAIAP
LAEAVRRTNS YDRICLTSFS DERLTRARAA IGREVCSSLG PRGVAALRAA AATSGYGRLL
TRLARAGVPC AQVPLGFRGL RVTTASLVRT AHALGMQIHV WTVNDTRVME RVLDLGVDGV
MTDNISGLRE VLEARGQWHP GRLAA