Gene Sros_5487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5487 
Symbol 
ID8668781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp6005805 
End bp6006314 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content73% 
IMG OID 
ProductTranscriptional regulators-like protein 
Protein accessionYP_003340987 
Protein GI271966791 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.303163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0138039 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCT CTCCCGCGTC CGCCGACCCG CCTGGCAGCT GGTTGCACGA GGACCTGCAC 
TGGCTGTTCG CCCGGCTGAA GCAGGGCCTC TCCACGGCGG AGGCCGCGGT GGTGCGGGAG
CACGGCATGA ACCTCTGGGG CTACACGGTG CTGATGGCGA TCGTCGAGGC GCCCGCCCGC
ACCCAGCTCG CCCTCGCCCA GGCCGTGTCG GTCGACAAGA GCAAACTGGT CCTCATCCTC
GACGAGCTGG AGGGCGCCGG CCTGGTTCTC CGCCGGCCGG ACCCCGCCGA CCGCAGAGCC
CGCATCATCG AGGTCACCCC CCGGGGGAGC CGCGCGCTCA AGGCCGCACG CGGTGACATC
GAGGCGGTCG AGGAGCGGCT GCTGGCCGAC CTCGACGTCC CGGCACGGAC CGCGCTGAGG
GACGCGCTAC GGCATCTCGC CGGCGCTCCC ATCCTGAGGG TCGAGGACGG GCAGTCACCC
GGAACCGCCT GCCCCCCGCA CCAAGCCTGA
 
Protein sequence
MATSPASADP PGSWLHEDLH WLFARLKQGL STAEAAVVRE HGMNLWGYTV LMAIVEAPAR 
TQLALAQAVS VDKSKLVLIL DELEGAGLVL RRPDPADRRA RIIEVTPRGS RALKAARGDI
EAVEERLLAD LDVPARTALR DALRHLAGAP ILRVEDGQSP GTACPPHQA