Gene Sros_5472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5472 
Symbol 
ID8668766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5992042 
End bp5992638 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content72% 
IMG OID 
Productputative transcriptional regulator, XRE family 
Protein accessionYP_003340972 
Protein GI271966776 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0377247 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAATG CGGAGGAGGC CACGCTCCAG AGCCCCGGTT CCGAGCAGGT GGAGGCCCGC 
CTGGCGGATC GGCTCGCACA GCTGCGGGTG GAGCGCGGCT GGTCACTGGA GGAGCTGGCA
CAGCGCACGG GCGTGAGCCG CTCGACGCTG TCACGGCTGG AGCGGATGGA GATCAGTCCG
ACGGCGGCGA TGCTGGGCAA GCTGTGCGCG GCGTACGGGC GGACGATGTC GCAGCTCCTG
GCCGAGGCGG AGGCGGAGCC GCCGCAGACG GTGCGGGCCG ACCGGCAGGT GGTGTGGCGG
GATGAGACCT CGGGCTTCAC CCGGCGGTCG GTGTCCCCAC CCCACCCCGG GCTGCGCGGC
GAGATCGTCG AGGGTGTTCT GCGACCGGGC GCGGACATCT CATACGACGG ACCGCCCGTG
CCGGGCCTGG AGCAGCACAT CTGGGTGCTG GAGGGTGTGC TGGAGGTCAC CACGGGCGGC
GGCGTGCACG AGATCCGGGC AGGAGACTGC CTGCGTTTCC GGTTGTGGGA CCGGTCGCGG
TTCCACTGCC CGGGCCCCGA CCCGGTCCGC TACGCCCTGA TGATCGTCCT ACCGTGA
 
Protein sequence
MRNAEEATLQ SPGSEQVEAR LADRLAQLRV ERGWSLEELA QRTGVSRSTL SRLERMEISP 
TAAMLGKLCA AYGRTMSQLL AEAEAEPPQT VRADRQVVWR DETSGFTRRS VSPPHPGLRG
EIVEGVLRPG ADISYDGPPV PGLEQHIWVL EGVLEVTTGG GVHEIRAGDC LRFRLWDRSR
FHCPGPDPVR YALMIVLP