Gene Sros_5451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5451 
Symbol 
ID8668745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5973818 
End bp5975041 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content69% 
IMG OID 
Productmajor facilitator transporter 
Protein accessionYP_003340951 
Protein GI271966755 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0131975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.150445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCTACAG CCACCACCTC CACCGCCGCC CCCGCCATGC CGACACGATC ACCTCTGATC 
GGCTGGCTGG CCGTCATATC GGTGATGATG GGGATCTTCT CGATCGTCAC CGCCGAGATC
CTGCCGATCG GCCTGCTGAC GTCCATCGGG TCCAGTTTCG ACGTCTCCGA CGGCGCCGCG
GGCCTGATGA TGACGATGCC CGGCATCCTG GCCGCGATCG CCGCCCCGGT GGTCACCGTC
GCGACCGGAC GCCTCGACCG GCGCCTGATG CTGTGCGCCC TGATGCTCCT GCTGGCCATC
GCGGACTTCC TCGCGGCCGC CGCACCGTCC TACTGGGTCA TGGTGATTTC CCGGATCCTG
GTCGGGCTGG TCATCGGCGG TTTCTGGTCG ATCGGCGCCG GCCTCGCCGT ACGGCTGGTG
CGGCCGGAGC GGGTCGGCAC GGCGACGGCG GTGATCTTCT CCGCCGTCCC CCTGGGATCC
GTGTTCGGCG TGCCCGCGGG CACGCTCATC GGGCATCTCG CGGGCTGGCG CGAGGCCTTC
GTCATCATGG GTGTGATGAC GCTGGGGGTG TTCATCGCGC TGATCGTGCT GCTGCCGCCG
CTGCCCGCCG TCCAGGCGAC CCGGTTGAAG GTCCTCGGTG ACCTGTTCCG CAGCACCGGT
GTCCGCATCG GACTCGTCCT GACATTTCTC ATAGTGACAG CTCATTTCGG GACCTACACC
TACGTGACCC CTTTCCTGCA GCAGGTCACC CAGGTCAGCC CCGGTCTGAT CACCACGTTC
CTGCTCGTGT ACGGCGTCGC CGGAATCGTC GGCAACTTCA TCGCGGGCGC GACGGTGACC
CGCAACCTGC GGACCACGTT CATCGCCGCC GGCTGCATGC TCGCCGGCGC GACCCTGCTC
CTTCCGGTCC TCGGCAGGGG ACACGCCGGG GCGATCGTGC TGCTCATCGT GTGGGGGCTG
GCCTACGGCG CCGTGCCGGT CTGCTCGCAG ACCTGGTTCG CCACCTCGGC CCCTCACGCG
ACGGAGGCGG CCTCCATCCT CTTCACCTCC TCCTTCCAGG CCACCATCGC CATCGGTGCC
CTGCTCGGAG GTGTCGTGGT GGACGCCGCC TCCCCGTCGG CCGTCATGGT GCTCGGTGGC
GCGGTCGCGA TCCTCATGGT GCTGACGGCC GCCGCCGCCC GAGCCGTACC CGGAGCGGCG
TCGGCGCGTC CGGACGCGAG GTAG
 
Protein sequence
MPTATTSTAA PAMPTRSPLI GWLAVISVMM GIFSIVTAEI LPIGLLTSIG SSFDVSDGAA 
GLMMTMPGIL AAIAAPVVTV ATGRLDRRLM LCALMLLLAI ADFLAAAAPS YWVMVISRIL
VGLVIGGFWS IGAGLAVRLV RPERVGTATA VIFSAVPLGS VFGVPAGTLI GHLAGWREAF
VIMGVMTLGV FIALIVLLPP LPAVQATRLK VLGDLFRSTG VRIGLVLTFL IVTAHFGTYT
YVTPFLQQVT QVSPGLITTF LLVYGVAGIV GNFIAGATVT RNLRTTFIAA GCMLAGATLL
LPVLGRGHAG AIVLLIVWGL AYGAVPVCSQ TWFATSAPHA TEAASILFTS SFQATIAIGA
LLGGVVVDAA SPSAVMVLGG AVAILMVLTA AAARAVPGAA SARPDAR