Gene Sros_5436 details

Gene Information

• Locus tag: Sros_5436
• ID: 8668730
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Streptosporangium roseum DSM 43021
• Kingdom: Bacteria
• Replicon accession: NC_013595
• Strand: -
• Start bp: 5956171
• End bp: 5956905
• Gene Length: 735 bp
• Protein Length: 244 aa
• Translation table: 11
• GC content: 69%
• Product: hypothetical protein
• Protein accession: YP_003340937
• Protein GI: 271966741

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 22
• Fosmid unclonability p-value: 0.557208
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAAGATCA TCGTGATGGG TGGGACCGGG CTCGTCGGGT CGCAGGTCGT CAAGATCCTC 
AAGGCGGCCG GGCACGAGGC GGTGCCCCAC TCGCAGTCCA CCGGCGTGGA CCTCCTCAGC 
GGCCAGGGGC TGCCGCAGGC GCTGGTGGGT GCCGACGCCG TCGTCAACCT GACGAACTCG 
CCCACCTTCG ACGAGGCCTC GCTCGCCTTC TTCCAGACGA CCATGGACAA CCTCCTGGAG 
GCCGCCCGGC GTGAAGGTGT CGGCCACGCC GTCATCCTGT CCATCGTCGG CGCGGACCAG 
GTGCCCGACC TCGACTACTA CCGTGCCAAG GTCCTGCAGG AGGACATCCT CAAGGCAGGC 
CCCATCCCGT ATTCGATCGT GCGCGCCACC CAGTTCTTCG AATTCATGGA CGCGGTCCTG 
TCCTGGTCCG CCGACGAGGA GACCGTTCGC CTGCCTGCCA CCCCGCTGCA GCCCATCGCC 
TCGGCCGACG TCGCCCAGGC CGTGGCCGAG GTCGCTGCCG GCAGTCCGCT CCAGGGCACC 
CGCGACATCG CCGGTCCCGA TGTCTTCCCG CTGGACGAAC TCGGCAGGAT CACGCTCGCG 
GTCCGCGGCG ACAGGCGCAG CGTCACCACC GACGACAGCG CCGGAATGTT CGCGGCCGTA 
CCCGATGACG CCATCATCGC CAAGGACGGC GCCCGCATCG CTCCGACGCA CTACCGGGAC 
TGGCTCACCG CCTGA 

 

Protein sequence

MKIIVMGGTG LVGSQVVKIL KAAGHEAVPH SQSTGVDLLS GQGLPQALVG ADAVVNLTNS 
PTFDEASLAF FQTTMDNLLE AARREGVGHA VILSIVGADQ VPDLDYYRAK VLQEDILKAG 
PIPYSIVRAT QFFEFMDAVL SWSADEETVR LPATPLQPIA SADVAQAVAE VAAGSPLQGT 
RDIAGPDVFP LDELGRITLA VRGDRRSVTT DDSAGMFAAV PDDAIIAKDG ARIAPTHYRD 
WLTA