| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5398 |
|---|
| Symbol | |
|---|
| ID | 8668692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 5915296 |
|---|
| End bp | 5916279 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | helix-turn-helix type 11 domain protein |
|---|
| Protein accession | YP_003340903 |
|---|
| Protein GI | 271966707 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.229533 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.331781 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGCGA GTCGTCTGCT GTCACTCCTG CTGCTCCTGC AGACCCGGGG GCGCATGACG
GCCACCGAGC TGTCGGAGGA GCTGGAGGTC TCGGTCCGGA CGGTCTACCG GGACGTGGAG
GCCCTGTCGT CGGCGGGGGT GCCGGTCTAC GCCGATCGCG GCCCGGCCGG AGGATACCGG
CTGCTGGACG GCTACCGCAC CCGCCTCAAC GGGCTGACCG CCGAGGAGGC CTCCTCGCTG
TTCCTGGCCG GGCTGCCCGG CCCCGCCGCC GAGCTGGGGC TGGGGGAGGT GGCCGCCAAC
GCCGAGCTGA AACTGCTCGC CGCGCTGCCT CCCGAACCGC GCTTCCACGC CTCCCGGATG
CGCGAGCGCT TCCACCTGGA CGTCCCGGGG TGGTACAGAG GCGCCGACGA GGCGCCCTTC
CTGGGGGAGG TCTCCGAGGC GGTGTGGGAC CAGCGCCCGC TGCGCATGAC CTACCGCCGC
TGGGGCCCGC GCGACGTCGA GCGCCTGGCC CACCCCTACG GCCTCGTCCT CAAGGGCGGA
TCGTGGTACA TGGTGGCGGC CGTCGGCGGG GGAGAGCCGC GCACCTACCG CGTGTCGCGG
ATCATCGCCG CCGAGATCGC CGAGGGCCGT TTCGAACGGC CCGGAGACTT CGAGCTGGCC
GCCTACTGGG AGCGCTACGC GGCCGACTTC CGGGCCCGGA TGTACACCGC CGAGGCCCTG
GTGCGGGTGG CGCCCGGCAT CGAGGCCATG TTCCGCTACA CCGTGGGCGC CGATGTCGCC
GACGCCGCAC TGGCCGAGGC GGGCCCGCCC GACGATCGCG GCTGGGTCGT CGTGCGCCTG
CCGATCGAGT CGGTCAGGCA CGCCCACTGG CTGCTGCTGC GCCTGGGCGC CGACATCGAG
ATCCTGGAGC CCGCCGAGCT GCGCGCCCAG ATGGCCGCCA CGGTCGCCGA GCTCGGCGGG
CTGTACGGCG CGCACCGGGA CTGA
|
|---|
| Protein sequence | MRASRLLSLL LLLQTRGRMT ATELSEELEV SVRTVYRDVE ALSSAGVPVY ADRGPAGGYR
LLDGYRTRLN GLTAEEASSL FLAGLPGPAA ELGLGEVAAN AELKLLAALP PEPRFHASRM
RERFHLDVPG WYRGADEAPF LGEVSEAVWD QRPLRMTYRR WGPRDVERLA HPYGLVLKGG
SWYMVAAVGG GEPRTYRVSR IIAAEIAEGR FERPGDFELA AYWERYAADF RARMYTAEAL
VRVAPGIEAM FRYTVGADVA DAALAEAGPP DDRGWVVVRL PIESVRHAHW LLLRLGADIE
ILEPAELRAQ MAATVAELGG LYGAHRD
|
|---|
| |