| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_5396 |
|---|
| Symbol | |
|---|
| ID | 8668690 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 5914006 |
|---|
| End bp | 5914569 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003340901 |
|---|
| Protein GI | 271966705 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.12309 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.209987 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATCT TCCTGGAGAC CGACCGCCTG ACGCTACGCC GTTTCACCGG GGCCGACGAG
GACAATCTGG TCGAGCTCGA CGGCGACCCC GAGGTCATGC GCTTCCTCAA CGGAGGCAGG
CCGACTCCCC GCGACGAGAT CCGCGACAGA GTCCTGCCCG CCTTCCTCGG CTACTACGAG
CGGTTCGAGG GGTTCGGCTT CTGGGCGGCC GTGGAGAGGT CCACCGGACG GTTCCTGGGC
TGGTTCCACT TCCGGCCGCG CCGGGACGAG CCGCGTGAGG GCGAGGTCGA GCTCGGCTAC
CGTCTGCGCC GGGCCGCCTG GGGGAGGGGT TACGCCACCG AGGGGTCGCG TGCGCTGATC
CACAAGGGAT TCACCGAGCT CGGCGTGGAC CGCGTGTTCG CCGGGACGAT GGCGGTCAAC
CTCGGCTCCC GGCGCGTGAT GGAGAAGTCC GGCCTGACGC TGGTGCGCAC CTTCCACCAG
GACTGGCCGG ACGTCATCGA CGGTTCCGAG CACGGAGAGG TCGAGTACGC CCTGACCAGG
GCCGACTGGC AGGCGCGTCG CTGA
|
|---|
| Protein sequence | MQIFLETDRL TLRRFTGADE DNLVELDGDP EVMRFLNGGR PTPRDEIRDR VLPAFLGYYE
RFEGFGFWAA VERSTGRFLG WFHFRPRRDE PREGEVELGY RLRRAAWGRG YATEGSRALI
HKGFTELGVD RVFAGTMAVN LGSRRVMEKS GLTLVRTFHQ DWPDVIDGSE HGEVEYALTR
ADWQARR
|
|---|
| |