Gene Sros_5332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5332 
Symbol 
ID8668626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5846096 
End bp5846734 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content72% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003340839 
Protein GI271966643 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.780657 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCACGA CCAGAGACAG CACCACCCCA TCGGGCGACC GGCGCGTACG CCGCACCCAC 
GCGGCCCTGG CAAGCGCCCT GATCCAGCTC GTCGAGGAGC AGGACCTGTC CCGGATCAGC
ATCGCCGACG TCGCGGAACG CGCCGGAGTG AGCCGCTCGA CCTTCTACGA CCACTACCGG
GACGTCCACG AGCTGGCCGA GACCGCCTGT ACCGCGATGA TCGACGGCTT GATCGGCTCT
CTGCCCGCCC CCGGCATCGA TTCGGCGGAT CCGGCGCCGG AGGCGACCCA GTCGCTGGAG
GCGTTCTTCG CCAGTCTCGC CCAGCACGCC GGGCTCTACC GCGCCCTGCT GGGGCCACAG
GGCAGCGCGC GCCTCGTCGA CCACATCCGC CGGCGCATCG CCGCGACCGT CTACGACCGC
ATACACCAGG CCGCTTCCGG CAACGATCTC CCGGAGCTCG CCGGCTCGCC GCCGGACATC
CCGCACGACG TCCCGGCCGC GTTCACCGCG GGAGCGCTCA TCGGTGTGGC CGCCGACTGG
CTCCAGCGCG GATGCCCGCG GCCACCGGCC GAGATGGCCA CCCTGACCTG GCCGCTCTTC
AGCGCGCTCT ACCACGTCGA CGCCGGCACG CTCACCTGA
 
Protein sequence
MATTRDSTTP SGDRRVRRTH AALASALIQL VEEQDLSRIS IADVAERAGV SRSTFYDHYR 
DVHELAETAC TAMIDGLIGS LPAPGIDSAD PAPEATQSLE AFFASLAQHA GLYRALLGPQ
GSARLVDHIR RRIAATVYDR IHQAASGNDL PELAGSPPDI PHDVPAAFTA GALIGVAADW
LQRGCPRPPA EMATLTWPLF SALYHVDAGT LT