Gene Sros_5288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5288 
Symbol 
ID8668582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5805630 
End bp5806844 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content63% 
IMG OID 
Productmajor facilitator transporter 
Protein accessionYP_003340799 
Protein GI271966603 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.564821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACAC AGGATGAACG CCCGTCCTCG CCCCTGAAGG CATGGCTGGG TGTCGCCGCG 
ATCACGGCCA GCTTGTTCGT CTTCCTCACC ACCGAGCTGA TGCCCATCGG CCTGCTCACT
CCGCTGAGCG CGAGCCTGGG TATATCGGTG GGTGTCGCCG GGCTGATGGT TACTTTGCAG
GGCATCTCGG CCGGGCTGGG CGTACCGTTC ATCGTGGCCT GGACCAGGCG CGTCAACCGG
CGCGTGCTGC TGTCCACGCT ACTGGCGATA TTGGCTCTGG GAAACCTGAT CACCGCCGTC
TCGCCGAACT ACGCACTGAT CTTGACGACG CGGCTCATCA TGGGATTCGC CAGCGGCGTG
TTCTGGGCCA TAGGCGTGAG CATGGCGATG CGCCTTGTTC CGGAACGCCA CGCGAGCAGG
GCGGCCGCAG TCGTGATGTC CGGCATCTCG ATCGCCACGG TGGTGGGCAT ACCGCTGGGA
ACAATCCTCG AAAGCCTCAC CGACTGGCGG ACCACGTTTC TCATCTGGGC CGGCCTCAGC
GTGCTGGTGT TCCTCGCGGT CACTGCCGTG GTCCCGTCGC TGCCGTCGGC GAACGCGGTC
TCGGTCCGGG AGGTCTTCGG GCTCCCGCTC AAGAACGTGC AGCTACGCCT GGTGTTGTTC
ATCGTCGTGT TCTTCGTGCT CGGCCATTTC GGGGCGTACA CTTTTGTGCG GCCCTTCTTG
GAGGAGAATG CGTCCGCCAC GCCCGTCTTC ATCACCGTAG TGCTGATAAT TTTCGGTGTC
GGAGGCGCCG TCGGAAACTT TATCGCCGGA TACACGGTGA ACAAAAATCT GAGGGGCAGC
TTCGTCGTCG GCATCGTGGG ACTCGTGGTG TCCCTGCTGT TGCTGCTCAC GATCGGTGAC
GGGCAGGCCG GTTCGATTGT TTCGCTGGTC CTCTGGGGGC TTTCCTTCGG CGTGGTGCAG
CTGTGCCAGG TCAACATGAC GCTCGCTGCG GCGCCGAAAA CCTTCGAAGC CGCGATGTCG
CTCAACACCA TGGCATACAA CACATCCATC GCACTCGGAG CGCTTTTCGG TGGACTGTTC
GCCGATAATG CAGGTGTCAC GAGTGTCGTC TGGTTCGGTG TGGCGCTGAC AGCGGCTTCG
CTGCTCCTCA GGCTCGCCAC CGGCCGGAAG TCCTCGAGCG CCGCCTCTCC GGATGAGCTG
GTCACCAGTG GATAA
 
Protein sequence
MLTQDERPSS PLKAWLGVAA ITASLFVFLT TELMPIGLLT PLSASLGISV GVAGLMVTLQ 
GISAGLGVPF IVAWTRRVNR RVLLSTLLAI LALGNLITAV SPNYALILTT RLIMGFASGV
FWAIGVSMAM RLVPERHASR AAAVVMSGIS IATVVGIPLG TILESLTDWR TTFLIWAGLS
VLVFLAVTAV VPSLPSANAV SVREVFGLPL KNVQLRLVLF IVVFFVLGHF GAYTFVRPFL
EENASATPVF ITVVLIIFGV GGAVGNFIAG YTVNKNLRGS FVVGIVGLVV SLLLLLTIGD
GQAGSIVSLV LWGLSFGVVQ LCQVNMTLAA APKTFEAAMS LNTMAYNTSI ALGALFGGLF
ADNAGVTSVV WFGVALTAAS LLLRLATGRK SSSAASPDEL VTSG