Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5288 |
Symbol | |
ID | 8668582 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 5805630 |
End bp | 5806844 |
Gene Length | 1215 bp |
Protein Length | 404 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | major facilitator transporter |
Protein accession | YP_003340799 |
Protein GI | 271966603 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.564821 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCACAC AGGATGAACG CCCGTCCTCG CCCCTGAAGG CATGGCTGGG TGTCGCCGCG ATCACGGCCA GCTTGTTCGT CTTCCTCACC ACCGAGCTGA TGCCCATCGG CCTGCTCACT CCGCTGAGCG CGAGCCTGGG TATATCGGTG GGTGTCGCCG GGCTGATGGT TACTTTGCAG GGCATCTCGG CCGGGCTGGG CGTACCGTTC ATCGTGGCCT GGACCAGGCG CGTCAACCGG CGCGTGCTGC TGTCCACGCT ACTGGCGATA TTGGCTCTGG GAAACCTGAT CACCGCCGTC TCGCCGAACT ACGCACTGAT CTTGACGACG CGGCTCATCA TGGGATTCGC CAGCGGCGTG TTCTGGGCCA TAGGCGTGAG CATGGCGATG CGCCTTGTTC CGGAACGCCA CGCGAGCAGG GCGGCCGCAG TCGTGATGTC CGGCATCTCG ATCGCCACGG TGGTGGGCAT ACCGCTGGGA ACAATCCTCG AAAGCCTCAC CGACTGGCGG ACCACGTTTC TCATCTGGGC CGGCCTCAGC GTGCTGGTGT TCCTCGCGGT CACTGCCGTG GTCCCGTCGC TGCCGTCGGC GAACGCGGTC TCGGTCCGGG AGGTCTTCGG GCTCCCGCTC AAGAACGTGC AGCTACGCCT GGTGTTGTTC ATCGTCGTGT TCTTCGTGCT CGGCCATTTC GGGGCGTACA CTTTTGTGCG GCCCTTCTTG GAGGAGAATG CGTCCGCCAC GCCCGTCTTC ATCACCGTAG TGCTGATAAT TTTCGGTGTC GGAGGCGCCG TCGGAAACTT TATCGCCGGA TACACGGTGA ACAAAAATCT GAGGGGCAGC TTCGTCGTCG GCATCGTGGG ACTCGTGGTG TCCCTGCTGT TGCTGCTCAC GATCGGTGAC GGGCAGGCCG GTTCGATTGT TTCGCTGGTC CTCTGGGGGC TTTCCTTCGG CGTGGTGCAG CTGTGCCAGG TCAACATGAC GCTCGCTGCG GCGCCGAAAA CCTTCGAAGC CGCGATGTCG CTCAACACCA TGGCATACAA CACATCCATC GCACTCGGAG CGCTTTTCGG TGGACTGTTC GCCGATAATG CAGGTGTCAC GAGTGTCGTC TGGTTCGGTG TGGCGCTGAC AGCGGCTTCG CTGCTCCTCA GGCTCGCCAC CGGCCGGAAG TCCTCGAGCG CCGCCTCTCC GGATGAGCTG GTCACCAGTG GATAA
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Protein sequence | MLTQDERPSS PLKAWLGVAA ITASLFVFLT TELMPIGLLT PLSASLGISV GVAGLMVTLQ GISAGLGVPF IVAWTRRVNR RVLLSTLLAI LALGNLITAV SPNYALILTT RLIMGFASGV FWAIGVSMAM RLVPERHASR AAAVVMSGIS IATVVGIPLG TILESLTDWR TTFLIWAGLS VLVFLAVTAV VPSLPSANAV SVREVFGLPL KNVQLRLVLF IVVFFVLGHF GAYTFVRPFL EENASATPVF ITVVLIIFGV GGAVGNFIAG YTVNKNLRGS FVVGIVGLVV SLLLLLTIGD GQAGSIVSLV LWGLSFGVVQ LCQVNMTLAA APKTFEAAMS LNTMAYNTSI ALGALFGGLF ADNAGVTSVV WFGVALTAAS LLLRLATGRK SSSAASPDEL VTSG
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