Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5286 |
Symbol | |
ID | 8668580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5800933 |
End bp | 5803239 |
Gene Length | 2307 bp |
Protein Length | 768 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | M6 family metalloprotease domain protein |
Protein accession | YP_003340797 |
Protein GI | 271966601 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.826763 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.474282 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTAAGC TCATCACCAT GCTCGCGGCC GGGCTGGTCG GGACGGCCCT GGGTGCCTCC GCGCTGCCCG GTCTCGCCTC GGCGGACCCG GGCCCCAAGC TTCCCGCCGC CAAGCCCGGT GACGGCCGGC ATTCGGATGC GACCAGTCCG TTCGCGATCG AAGAGCAGTC TCTTCGGACC AGAGCCATGA AGCAGGCGCT GTCCGCCCCC CAGGCACGCG CGCTCCCCTC AGGCAAGGTC AAGGTCGGCG ACCGCTACGT CGAACTCGCG CTCGAACGCA AGGACAAGAT TTTCACCGTG CTCGCCGAAT TCGGCGACAA AATCGACAAC ACGACCCTGC ACGGAGGAAC GATCCGCTAC GGCGGCGTAC CCGGCCCGCT GCACAACCGG ATCCCCAAGC CCCAGCGGAG CTACGACAAC CACACGCTCT GGCAGCCGGA CTTCAACCGG GCCTACTACC AGGACATCTA TTTCAACGGC TCAAAGGGGG CCAACTCGCT CCGTAACTTC TACCGGCTCC AGTCCGCCGG CCGGTACGAC TTCGACGGCT ACGTCTCCGA CTGGGTGAAG GTTCCCTACA ACGAGTCCCG TTACGGCACG CCGCGCTGCG ACAGCGGCCT GGACTGCGAC CTCCCCCTGT TCGATTTCGT CAGGGACTCG GCCAACGCCT GGTACGACGC CGAGCGCGCC AAGGGCCGCA GCGTCGAGGA CATCACGGCC GAGCTCAAGT CCTACGACGT CTGGGACCGC TACGACCACG ACTTCGACGG CGACTTCGAC GAGCCCGACG GCTACCTCGA CCGGTTCCAG GTGATCCACG CCGGCGTCGA CGAGACGTGG GGCGGCGGCG CGCAGGGCGC AGACGCGCTG TGGGCGGTCA ACCACGACGC CTACTGGAAC ACGCGCGGAA GCTCCGGCCC CGCAGGCAAC CTGCGAGGCG GCACCCAGAT CGGCGACACC GGCGTCTGGG TCGGCAGGTT CCTGACCGCC GGCGAGAACA GCGGCGTCGG CCTGATCGCC CACGAGTACG GCCACGACCT GGGCTTACCC GACCTGTACG ACGGTGGCGG GAGCAACAGC GTCCAGTTCT GGTCGCTCAT GTCCAGTGCC TCGTACTTGA GCAGGAAGAA CGGGCAGAGC GGCGAGTACC CCGGAGACCT GGACGCCTGG AGCAAACTGC GGCTCGGCTG GCTGGCCTAC GACAGGGCCA AGGCCGCCAC GGCGTCCACG CACACCCTCG GCGTGAGCTC CTACAACACC GCAGACCCGC AGGCCGTCAT CGTCGATCTG CCGCCGCGCC GGGTCGACAC CGAGTTGGTC CAACCCGTCC AGGGCTCCCA CCAGTGGTGG AGCGGCAGGG GGGACTACCT CAACGAGACG CTCACGCGCC AGATCGACCT CACCGGCGTG ACGTCGGCGG CCCTGAACGC CAGAGTCTGG TATCAGATCG AGCAGGATTT CGACTATCTC TACGCCGAGG TCTCCGAGGA CGGCAAGGTC TGGACACCGA TCGGCGGCAC CGTCGGCGGG CAGCCGATCC CGAGCGTCAA CGGCGTCCCC GGTATCACCG GCCTCAGCGG CTGGACGGAC CTGAGCCTCC CACTGGACGC CTACGCGGGC AAGAAGATCC AGTTCCGGTT CCGCTACTTC ACCGATACCA ACACCACCGA GAACGGCTTC ATCGTCGACG CCATCACCGG CGCCGTCACC GACGACGCGG AGAACGGCGA CAACGGCTGG ACCGCGGCGG GCTTCAGCCG CGTCGGCAAG ATCGCGACCA AGGAGCACCC CCGCTCCTAC ATAGCCGAGA ACCGGCGCTA CACCGGCTAT GGCGCCTACC TCAGAACCGG TCCCTACAGC GCCGGCTTCG CCAACAACCC CGCCCGGCGC GAGATCTATG AGCACTACCC CTACCGGGAG GGCGTCCTCG TCTGGCTCTG GGACACCTAC TACACCGACA ACGCCACCCG TAACCACCCC GGCGAGGGCA TGATCCTGCC GATCGACGCC CACCCGATCC CTCTGCTCTG GAAAGACAAC AGCATGGTCA ACGACCGGAT CCAGGGCTTC GACGCCCCCT TCGGCCTGTC TCCCACCGGC CGTTTCGCAC TGCACAGGGA CAGCGCCAAG ACGGTCTTCC CCTCGCTCCC CGCCACCCCG GCCTTCAACG ACCGCAGCGG CGTTTACTGG TACAGCACCA ACCCCTTGCG CGGCGTCCGG CCGCCCGACA GCAACACCGA GATCAAGGTG ACCCGGGAAG CCTCCGGGGG CCTTCGCACC ACCATCACGG TGGGTCCCGC CTCCTGA
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Protein sequence | MRKLITMLAA GLVGTALGAS ALPGLASADP GPKLPAAKPG DGRHSDATSP FAIEEQSLRT RAMKQALSAP QARALPSGKV KVGDRYVELA LERKDKIFTV LAEFGDKIDN TTLHGGTIRY GGVPGPLHNR IPKPQRSYDN HTLWQPDFNR AYYQDIYFNG SKGANSLRNF YRLQSAGRYD FDGYVSDWVK VPYNESRYGT PRCDSGLDCD LPLFDFVRDS ANAWYDAERA KGRSVEDITA ELKSYDVWDR YDHDFDGDFD EPDGYLDRFQ VIHAGVDETW GGGAQGADAL WAVNHDAYWN TRGSSGPAGN LRGGTQIGDT GVWVGRFLTA GENSGVGLIA HEYGHDLGLP DLYDGGGSNS VQFWSLMSSA SYLSRKNGQS GEYPGDLDAW SKLRLGWLAY DRAKAATAST HTLGVSSYNT ADPQAVIVDL PPRRVDTELV QPVQGSHQWW SGRGDYLNET LTRQIDLTGV TSAALNARVW YQIEQDFDYL YAEVSEDGKV WTPIGGTVGG QPIPSVNGVP GITGLSGWTD LSLPLDAYAG KKIQFRFRYF TDTNTTENGF IVDAITGAVT DDAENGDNGW TAAGFSRVGK IATKEHPRSY IAENRRYTGY GAYLRTGPYS AGFANNPARR EIYEHYPYRE GVLVWLWDTY YTDNATRNHP GEGMILPIDA HPIPLLWKDN SMVNDRIQGF DAPFGLSPTG RFALHRDSAK TVFPSLPATP AFNDRSGVYW YSTNPLRGVR PPDSNTEIKV TREASGGLRT TITVGPAS
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