Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_5179 |
Symbol | |
ID | 8668473 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 5693055 |
End bp | 5694296 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | glycosyl transferase |
Protein accession | YP_003340698 |
Protein GI | 271966502 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000882934 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGTGTGT TGTTGTCGAC GTATGGGTCG CGTGGGGACG TCGAACCGCT GGTGGGACTC GCGGTGCAAT TGCGGGCGCT CGGCGCGGAG GTGCGGGTGT GCGCTCCGCC GGACGAGGAC TTCGCGGAGC GGCTGGCCGG TGTCGGCGTG CCGCTGATGC CGGTCGGCCA GTCGGCGCGC GCGCTGACGA CCGCGGCGCC GCCGCCGTCG CCGGCGAACC TGCCCCAGCG CGCGGCCGAG TTGATCGCCG GCCAGTTCGA CGTGGTCACC GCGGCGGCCG AGGGGTGTGA CGTGCTGGTG GCGACCGGCG CGATGCCGGC CGCGGCCGGC GCGCGGTCGG TGGCCGAGAA ACTGGGCATC CGCTCCGTGT CCGTGACCTT CCAGCAGCTC ACCCTGCCGT CGCCGCACCA CCCGCCGCTG GCGTATCCGG GCCGGCCGTT CCCGCCGGAC GTGACCGACA ACCGGGTGCT GTGGGACCTG GACGCCCAGA GCATCAACGC GCTGTTCGGT GCGGCGCTCA ACACGAACCG GGCGTCGATC GGCCTGCCCC CGGTGGACAA CGTCCGCGAC TACGTCATCG GCGACCGGCC GTGGCTGGCG ACGGACCCGA CCCTGGACCC GTGGCAGGAG CCGGCGGACC TCGACGTCGT GCAGACCGGC GCGTGGATCC TGCCCGACGT TCGCCCACTC CCGGCCGAGC TGACGGCGTT CCTGGACGCC GGCACACCAC CGGTGTACGT GGGCTTCGGC AGCATGCCCA TGAGCGCCTC GACGGACGCC GCCCGGGTGG CCATCGAGGC GGTCCGCGCG CAGGGCCGCC GCGCGCTCGT CGGGCGCGGC TGGGCCGACC TGGCCCTGAT CGACGACCGG GACGACTGCT TCACCGTCGG CGAGGTCAAC CAGCAGGCGC TGTTCGGCCG GGTGGCCGCC GTCGTGCACC ACGGCGGCGC GGGCACGACG ACGACGGCCG CCCGGGCCGG CGCTCCTCAG GTGGTGGTAC CCCAGGTGGC GGACCAGCCG TACTGGGCCG GACGGGTGGC CGGCCTGGGC ATCGGCGCGG CACACGACGG TCCGGCTCCG ACCTTCGAGT CCCTGTCAGC CGCGCTCAGG ACCTCCCTGG CCCCCGAGAC CCGCGCGCGA GCGGCCGCCG TGGCCGGCAC GGTCCGCACC GACGGGGCGA CGGTGGCCGC GAAGCTGCTG CTCGACGCGG TCAGCCGGGA GAGGCCGCCC GGGTCCGCGT GA
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Protein sequence | MRVLLSTYGS RGDVEPLVGL AVQLRALGAE VRVCAPPDED FAERLAGVGV PLMPVGQSAR ALTTAAPPPS PANLPQRAAE LIAGQFDVVT AAAEGCDVLV ATGAMPAAAG ARSVAEKLGI RSVSVTFQQL TLPSPHHPPL AYPGRPFPPD VTDNRVLWDL DAQSINALFG AALNTNRASI GLPPVDNVRD YVIGDRPWLA TDPTLDPWQE PADLDVVQTG AWILPDVRPL PAELTAFLDA GTPPVYVGFG SMPMSASTDA ARVAIEAVRA QGRRALVGRG WADLALIDDR DDCFTVGEVN QQALFGRVAA VVHHGGAGTT TTAARAGAPQ VVVPQVADQP YWAGRVAGLG IGAAHDGPAP TFESLSAALR TSLAPETRAR AAAVAGTVRT DGATVAAKLL LDAVSRERPP GSA
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