Gene Sros_5157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_5157 
Symbol 
ID8668451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5670343 
End bp5671044 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content65% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003340678 
Protein GI271966482 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.23435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.1595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTCAC AGGAGGTGAT CGTGGAATCT GCACTTTCCG TGCTCATGGC GCCGTCGGAC 
TCGGAGTCGT TGCTGGAGCG CGCCTACATT GATGCCGTCG AGCAGGTTGA CGACACGGAC
GAGCTCCGTG CACGCATACT CGATGCGGCG TACGAGCAGT TCTGCCGTAT GGGTATCCGG
CGCTCCACGA TGGAGGACGT GGCCCGCCGT GCCGGGGTGT CACGAATCAC GGTCTACCGG
CGGTTCGCCT CGAAGGACGC GCTGGTCGAA CACGTCGTAC GTCGAGAGTT CCGCCGGTAT
TTCGACCGGT TCCTCATTGA TATAGAACAA GCCCGCACCG CTGCCGATCG GGTGGTTCTG
GGCTTCGTGA GCTCGTTACG CGCCATCCGG CGCAACCCGC TGATCGGCGG TCTGATCGCC
GCGGAACCGG ACCTGCTCGT GCCCTCCATG ATCAATGACG GGGGCCGGAC CCTCGCGACC
GTGCGGCAGT TCGTCGCGGG TCAGCTCCGC CGCGAGCAAC GCGCGGGCAA CGTGTCGAGC
GACTTGGACA CCGACCTCGT GGCCGAACTG ATGGTCCGGA TCTCCGCGTC CTTCCTGGCG
ATCCCCAGCC GGGTCATCGA CCTCGACGAC GACGGGCAAC TGGCCGGAGT GGCCCGGCGG
TTCCTCGTGC CCATGTTGGG ACCACCCGGC TCCCCGGATT GA
 
Protein sequence
MNSQEVIVES ALSVLMAPSD SESLLERAYI DAVEQVDDTD ELRARILDAA YEQFCRMGIR 
RSTMEDVARR AGVSRITVYR RFASKDALVE HVVRREFRRY FDRFLIDIEQ ARTAADRVVL
GFVSSLRAIR RNPLIGGLIA AEPDLLVPSM INDGGRTLAT VRQFVAGQLR REQRAGNVSS
DLDTDLVAEL MVRISASFLA IPSRVIDLDD DGQLAGVARR FLVPMLGPPG SPD