| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4917 |
|---|
| Symbol | |
|---|
| ID | 8668211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 5447115 |
|---|
| End bp | 5448575 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | Signal transduction histidine kinase-like protein |
|---|
| Protein accession | YP_003340469 |
|---|
| Protein GI | 271966273 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGACGGG CCTGGCCCCT GCGGCATCGG CTGCTGGCCG CGCTGCTCGG TCTGTGCGCG
GTCGGGCTGA CGGCGTTCGC CACCGCGAGT GTGCTGCTGC TGGAGCGTTC ACTGCTGTCC
AGGGTAGACG CCCAGCTGAC CGAGACGGCC ATCACCTTCG GCCGGCGCCC GCTCCCGCCT
CCGCCGCCGC CACCGGTGGA CAGGGGGCAG TCCGTGCAGC TCCCGACACA GTTCAAGATC
GCCTTCTACG GCCCTTCCGG GACTTTGCTG CGCAGCCTGC CCGCCGAGAA CGGTGACGGA
CCGGCCATCC CCGCCGCGGC GATATCCACC ATCCCGCAAG GCCCCATCAC CGTGCCCGCC
ACGGGGACGG GTCAGTGGCG GGTGCTGGTC AGGAACCTGC CCGACGGCAC CAGGCTGACC
GTGTCAATGT CGCTGGAGCC CAACCGGGCG ACCGTGCACC AGCTCCTGGT CATCGAGGCG
GCGGCGGGCA GCCTGGTGCT GCTGCTGCTG GGCACGCTCG CCTTCGCCGT GGTACGGCTG
GGCCTGCGCC CGCTGACCCG CATGGAGCAG ACCGCCGAGG CCATCGCGGG CGGAGACATC
GACCGCAGGG TCAGTGACAC CGACCCCGAC ACCGAGACAG GCCGTCTCGG CGGCGCGCTG
AACACCATGC TGGAGCGCCT GGCCACCGCG CTCCGCGAGT CCGAGCGCTC CGAACGGCGA
TTGCGGCACT TCGTCGCCGA CGCCTCCCAT GAACTGCGCA CCCCGCTCAC CTCCATCAGG
GGCTTCGCCG AGCTCTACCA TCACGGCCAG GACGCCAGGG ACCCGGCGGC CGAGCGGCTG
CTGCGCAGAA TCGAGGCCGA GGCCGAGCGC ATGGGGGTCC TGGTGGAGGA CATGCTGCTG
CTGGCCAGGC TGGACCAGGA GCCCGCGCTG GAGCCCAGCG TCGTGGACCT GCACGTGCTG
GCCGGAGATG TGGTGCACGC CGCTCGCGCT CGCGATCGCG AGCGGCCGAT CCGGCTGATC
ATCTCCGACG GGCCGGTGTT CGTGCGCGGC GACGAGCGCC GCTTGCATCA GGTCATCGCC
AATCTGGTCG GCAACGCCAT CCAGCACACC TCTTCGGGCA CCGAGATCGG CCTCACCGTC
GCTCCGCGAG CGGTTGCCGG GGTTCCGGCT CCCGGCGTCG TGCATGCCGG GGCCGGACCC
GCCCCCCACC GCAGAGCCGC GCTACTCGAA GTGCGAGACG AGGGGCAGGG CATCGATCCC
GAGCACCTGC CGTACCTGTT CGACCGCTTT TACCGGGCCG ATCCGGACCG CTCCCGCGAC
AGCGGCGGAA CCGGACTGGG CCTGGCCATA GCCGCCGCGC TCGTGCAGGC GCACGACGGC
CGGATCGAGG TGACCAGCAC CCCCGGCCGC GGCACCACCT TCCGCGTGCT TCTCCCGCTG
GAGCAGCCCC AGGACGGCTG A
|
|---|
| Protein sequence | MRRAWPLRHR LLAALLGLCA VGLTAFATAS VLLLERSLLS RVDAQLTETA ITFGRRPLPP
PPPPPVDRGQ SVQLPTQFKI AFYGPSGTLL RSLPAENGDG PAIPAAAIST IPQGPITVPA
TGTGQWRVLV RNLPDGTRLT VSMSLEPNRA TVHQLLVIEA AAGSLVLLLL GTLAFAVVRL
GLRPLTRMEQ TAEAIAGGDI DRRVSDTDPD TETGRLGGAL NTMLERLATA LRESERSERR
LRHFVADASH ELRTPLTSIR GFAELYHHGQ DARDPAAERL LRRIEAEAER MGVLVEDMLL
LARLDQEPAL EPSVVDLHVL AGDVVHAARA RDRERPIRLI ISDGPVFVRG DERRLHQVIA
NLVGNAIQHT SSGTEIGLTV APRAVAGVPA PGVVHAGAGP APHRRAALLE VRDEGQGIDP
EHLPYLFDRF YRADPDRSRD SGGTGLGLAI AAALVQAHDG RIEVTSTPGR GTTFRVLLPL
EQPQDG
|
|---|
| |