| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4848 |
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| Symbol | |
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| ID | 8668142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptosporangium roseum DSM 43021 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013595 |
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| Strand | + |
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| Start bp | 5370536 |
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| End bp | 5372155 |
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| Gene Length | 1620 bp |
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| Protein Length | 539 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | |
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| Product | peptide/opine/nickel uptake ABC transporter periplasmic substrate-binding protein |
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| Protein accession | YP_003340409 |
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| Protein GI | 271966213 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.227052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGTC GAGCCATACC CGTGGCCACC GCCCTCGCGC TGGCCCTGAC CGCGTGCGGC
CAGCAGGCCG CATCGCCGCA ACAGCAGGGG GCGAGCGAAG CGCCCAAGCT GGAGCTCAGA
ACCGTCACCG CCCCGGCCGC CGGGGAACTG GACAAGGCGA CGTGGAACCT GCCGTACGAG
CCGCAGACGA TCGACCCGAT CAGGTCGTTC AACTACGCCG AGAACACCGT GCTGGCCAAC
ATGTGCGAGA GCCTGCTGCG GCTGACCCCC GAGCTCGGCA TCGAACCCGG CCTGGCGGAG
AAGGCCGACA ACCCCAGCCC GACCACGTGG GTCTACACGA TCCGCGACGG CGTGAAGTTC
TGGGACGGCA CGCCGCTGAC CGCCGAGGAC GTCGCGGCCA GCCTCAACCG CCACCTCGAT
CCCGCACTCG GCACCTGGTG GGGCGACTAC TTCCACACCG TGGAGTCGAT CAAGGCGACG
GGGCCGATGC AGGTCACCGT CACGTTGAAG CAGCCCGACG TGCTGTTCAA CCAGGCGATG
GCCACCGCGG CGGGCGCGAT CGTCTCGGCC GAGTACGCCA AGAAGAAGGA TCTGGGCTCG
CCCACCGGCG GTGTGATGTG CACCGGCCCG TACAAATACG AGAGCTGGAA GTCCGGCGAC
TCGCTGACCA TCAAGCGCAA CGACGCCTAC TGGGACACCG CGTTGCGGCC CAAGACCAAG
GAGCTGGCCT TCCGGTTCAT CGCCGACGAG ACCACCGCCG TCAACGCGCT GCGCTCCGGC
GAGGTGGACG GGCAGTACTT CTACCTGCCT CCCGCGGGAC TCGGCCAGCT CCAGCAGTCC
ACGACCGGCT CGGTCACGCT CGGCAAGTCG CTGACCTTCT GGACGCTGCT GGGCGCCGCC
AAGACCGGCC CGTACGCCGA CCCGAAGGTC CGCCAGGCCC TGTCGCTGGC GCTGGACCGG
GCGGCCATCT CCAAGGTGGT CTTCCAGGGG ACGGCGGTGC CGCAGCGCAC CCTCGCGGGC
GCCGAATACT GGGGATACCA GCGGGACGTC TTCCAGAAGG CCTATGACGC GCTCCCCCCG
GAGACCCCCG ACCTGGCCAA GGCCAAGCAG TTGCTCACCG AGGCCGGCTC GCCCGCCCAG
ACCATCACCA TCGGGATCCA GGGCAGCTCG GCCGTCCACG AGCAGACCGC CAACCTGATC
AAGGCGACCG GCGAGGCGCT CGGCCTGAAG ATCGAGATCA AGGTGATCCC CGTCGAACAG
TACGGGAACC TCTACAGCGA CCCCAAGGCC CGTGAGGGCA TCGACGCCTT CTTCTCCACC
TGGTACGGCA ACGTGCCCGA CCCGCTCGAC ATCTACACCG TCTTCCTGGC GGGCGGCCGC
ACCAACTTCA ACGACTACGC GGCCGTGAAC GCCGACATCA CCAAGGCGCG GGCGGCCTAC
GACGAAGCGG AGCGGGCGGC GCTGGTCACG GCGATCCAGC AGAAGGTCAC CGCCGACGTG
CCGTGGATGC CGCTGAACAA CCTGCCGGTG ATCCTGTACA TGAACAAGCG GGTGACCGGA
GCCGTCGCCT CCTTCCCCTA CCTGTACTAC CCGTGGGCCG CGGGGCTCGG CGCGGCATGA
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| Protein sequence | MIRRAIPVAT ALALALTACG QQAASPQQQG ASEAPKLELR TVTAPAAGEL DKATWNLPYE
PQTIDPIRSF NYAENTVLAN MCESLLRLTP ELGIEPGLAE KADNPSPTTW VYTIRDGVKF
WDGTPLTAED VAASLNRHLD PALGTWWGDY FHTVESIKAT GPMQVTVTLK QPDVLFNQAM
ATAAGAIVSA EYAKKKDLGS PTGGVMCTGP YKYESWKSGD SLTIKRNDAY WDTALRPKTK
ELAFRFIADE TTAVNALRSG EVDGQYFYLP PAGLGQLQQS TTGSVTLGKS LTFWTLLGAA
KTGPYADPKV RQALSLALDR AAISKVVFQG TAVPQRTLAG AEYWGYQRDV FQKAYDALPP
ETPDLAKAKQ LLTEAGSPAQ TITIGIQGSS AVHEQTANLI KATGEALGLK IEIKVIPVEQ
YGNLYSDPKA REGIDAFFST WYGNVPDPLD IYTVFLAGGR TNFNDYAAVN ADITKARAAY
DEAERAALVT AIQQKVTADV PWMPLNNLPV ILYMNKRVTG AVASFPYLYY PWAAGLGAA
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