Gene Sros_4825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4825 
Symbol 
ID8668119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5345661 
End bp5346458 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content69% 
IMG OID 
ProductNADH ubiquinone oxidoreductase 20 kDa subunit 
Protein accessionYP_003340387 
Protein GI271966191 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0916068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGGC CCGCGGCCAC AGCCGGGCAC CCTCGGCTGG CGGTGTGGAA GTTCGCCTCC 
TGCGACGGCT GCCAGCTCAC CTTGCTGGAC TGCGAGGACG AGTTGCTGTC GGTCGCCGCC
GAGGTGGACA TCGCCTACTT CCTGGAGGCT TCGAGCGCGG TCGGGCCCGG GCCCTACGAT
CTGTCGCTGG TCGAGGGGTC GATCACTACT CCGGATGACC TGCGGCGGAT CCAGCATGTG
CGACGCGTGT CGAAGCGCCT GGTGACGATC GGCGCCTGCG CGACCGCAGG CGGCATCCAG
GCGCTACGCG ACTTCGCCGA CGTGCGCGAG TTCGCCTCGA TCGTCTACGC CCGGCCCGAC
TACATCGCCA CGCTGGAACG CTCCACTGCG ATCTCCGCCC ACGTTCCCGT CGACTTCGAG
CTGCGCGGCT GCCCCATCGA CAAAAGACAG CTGTTGGAGG TGATCTCGGC CTTCCTGGCC
GGCCGGCGCC CCTTCGTGCC CGCCCACAGC GTCTGCGTGG AGTGCAAGTC CCGTGGCAAC
GTGTGCGTCA TGGTGGCCCA CGGCACCCCC TGTCTCGGCC CGGTCACCCA GGCCGGTTGC
GGAGCGCTCT GCCCGGCGTT CAACCGGGGC TGCTACGGCT GTTTCGGCCC GATGGAGAGC
CCCAACTCCC GCGCGCTCAA CGCGCAGCTG CGAGAACTCG GCATGAGCAC CCCCGAACTG
GTGCGCGTCT ACCGGACGTT CAACGCCACC GAAGAACCCT TCCGCCAGGC GTCCGAGGAG
GCCGAAAGTG ACGCATAA
 
Protein sequence
MARPAATAGH PRLAVWKFAS CDGCQLTLLD CEDELLSVAA EVDIAYFLEA SSAVGPGPYD 
LSLVEGSITT PDDLRRIQHV RRVSKRLVTI GACATAGGIQ ALRDFADVRE FASIVYARPD
YIATLERSTA ISAHVPVDFE LRGCPIDKRQ LLEVISAFLA GRRPFVPAHS VCVECKSRGN
VCVMVAHGTP CLGPVTQAGC GALCPAFNRG CYGCFGPMES PNSRALNAQL RELGMSTPEL
VRVYRTFNAT EEPFRQASEE AESDA