| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4813 |
|---|
| Symbol | |
|---|
| ID | 8668107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 5333032 |
|---|
| End bp | 5335683 |
|---|
| Gene Length | 2652 bp |
|---|
| Protein Length | 883 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | Acyl-CoA synthetase (NDP forming)-like protein |
|---|
| Protein accession | YP_003340379 |
|---|
| Protein GI | 271966183 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.104591 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGGA CCGTTCCCGA TGAGTGCGAC GTCCTGCTGC GTGAGGGCGG CATCGCCCAC
ATCCGGCCGC TGCGGCCGGA CGACCGCGCA CGGCTGCACG AACTGGTCGA CAGGTCGTCC
GAGCACTCGG CCTACCTGCG TTTCTTCACC GGCGGCACGG CGACCGCCCA CGCCTACATG
GACCGCATCA CAGCATCGGA CTACCCGGGC CGCGCATTGG TAGCCCTGTC ACAGGGCCGG
CTGGTGGCGG TCGCGGAGTA CATCCCCGGG GATGCGGGCG ACGCCGAGAT CGCGATCTTG
ATCGACGACG GGATGCACCA CCACGGCCTG GGCACGTTGC TGGTGGAACA TCTCGCGTTG
AACGCCGCCG ACGAGGGTGT ACGCGAGCTG GTCGCCGACG TGCTCGCCGA GAACCGGCCC
ATGCTCCGAG TGCTGGACGA CATCGGGCTG GCCACCACTC GCGCGTTCGA CGACGGATCG
GTCGAGGTCC GGATAGATCC GCGCCCCACC CCGGGCATGC TGGAGCGGAT CGAGGCACGC
GCGCACCAGG CGGCATCGGC CTCCCTGCGG CGGCTGTTCC ACCCGGAGTC GGTCGCGGTG
ATCGGCGCCG GCCGCGCCCC CGGCGGGGTC GGCCACCGCA TCCTGCGAAA CCTCCTCCAA
GGAGGTTTTC CCGGCCCCGT CTACCCGATC AACCCACACG CCAGGCAAAT TTGCGGCCTG
CCCGTCTACG CGAATGTGGG CAGCGTGCCG GGCCCGATCG ATCTGGCGGT CATCGCGACC
CCGGCCCGCA CCGTGCCGGA GATCGCCCGC GACTGCGCCG GCCACGGCGT GCGGAACGTC
GTCGTGGTCA CGTCGGGATT CGCCGAGACC GGAGGGACAA GCGCGCAAGA CGAACTGCTG
AGGATCTGCC GGGAGGCCGG GATGCGGCTG GTCGGCCCCA ACTGTCTCGG CATCGTCAAC
ACCGCAGCCC GGCTCAACGC CGGCTTCCTG CCCCACCCGC CCGCCCCGGG GCGTCTGGCC
CTGATGTCAC AGTCCGGCGC GGTCGCGGTC GCCCTGATCG ACCGCGCCAA CCATCTGGAG
ATCGGCATCT CCTCCTTCGC CTCCGTCGGC AACAAGGCCG ATGTCAGCGG CAACGACCTG
CTGGAGTACT GGGAGGACGA CCCGGCGACC GACGTGATCA CGCTGTATCT GGAGTCGTTC
GGCAACCCCC GCAGGTTCGG CCGCATCGCA CGGCGGGTGA GCAGGCGCAA GCCGATCATC
GCGATCAAGA GTGGCCGCGG CGGCTCTGGT GAGCGGGCGG TCCGCTCCCA CACCGCGGCC
GCCGCCACTC CGGACGTGGC TGTCGACGCC CTGCTGAAAG CCTCGGGAGT CATCCGTGTG
GAGACCGTCC GGGACATGCT CGACACCGCG CGCCTCCTGG CCACCCAGCC ACTACCGCAG
GGCAGGCGGG TGGCCATCGT CGGCAACTCC GGCGGACCGC AGGCCCTTGC CGCCGACGCC
TGCGAGCAGC GCGACCTGCT GGTCCCCGAG CTGGCCCCGG TCACCCGCGG GCGGCTGCGT
TCCCGGCTGC CGGTCGCGGC AGCCGTGGCC AACCCCGTCG ACCTCACCGC CGGCGGCAGC
GCGCAGGAAC TGGCGTTCGC CATCGAGACC GTTCTGGCTG ATCCGGGCAT CGACACCGTC
ATGGTCGTCT ACACCCCGCC GTTCGGCTCC GGCCTGGGCC GGACCCGCCA GGCCATCGCC
CGCGCGGCCA TGTCGGCCGG CAAGACCGTG ACCGCGTGCA TCAGCGGGCA TGACGGCCTG
CTGGACGGAC GCGTGCCCTG CTACGCCTTC CCCGAGCAGG CGGTGCAGGC ACTGCGCCAC
GCGGTGGACT ACGCGTCCTG GCGCGCCGCG CCGCAGGCCC CGCCCGCCGA CCCGCGCCCA
GCCGACACCA CCGCGCGCGG CATCGTCGCA GCGGACCTGG AGTGCCATTC CGGCGGCCGG
TGGCTCGACT ACGGCACCGC CGCCCGCCTG CTCGGCTGCT ACGGAATCCA GATGGCCGAG
TCGATCGAGG CCGACGGGCC GGACAGCGCC GCGGCGGCGG CCGTCACGAT CGGGCCGCCG
GTGGTGCTCA AGGCCACCGG TCCGGACCTG GTGCACAAGA GCGACGTCGG TGGTGTCCGC
GTCGGTCTCG GCGCGCCGGA CGAGGTCAGC CGCGCCTACC GGGAGATGGC CGGCATGATC
GGACCGGCCA TGACCGGCGC GATCGTCCAG CCGATGATCG AGGCGGGTGT CGAGATCATC
ATCGGCGGCG TCGCGCACGA GGCCTTCGGC CCCATGCTCA TGGTCGGCAT GGGTGGCGTC
ACCGCCGAGC TTATGGCCGA CCGCTCCTTC CGGGTGCCGC CACTCGGCGA CCAGGACGCG
GCAGCGATGA TCGCCGAGCT CCGCTGTGCC CCTCTGCTGA CCGGCTATCG CGGACGCCCG
CGTGCCGACG TGGCCGCGTT GCGGGAGCAG ATCACCGGTG TCGGGAGGCT CCTGGACGAT
CTCCCGGAGG TGGCCGAACT CGACCTGAAT CCAGTGATCG TCACCCCGGC CGGCGCGGTG
GCCGTGGACG TGCGGGTACG GCTCGCCCCC GCGGCCCCGC CGCCGTCGCT CTTCCGCCGG
CGGCTGCGAT GA
|
|---|
| Protein sequence | MRRTVPDECD VLLREGGIAH IRPLRPDDRA RLHELVDRSS EHSAYLRFFT GGTATAHAYM
DRITASDYPG RALVALSQGR LVAVAEYIPG DAGDAEIAIL IDDGMHHHGL GTLLVEHLAL
NAADEGVREL VADVLAENRP MLRVLDDIGL ATTRAFDDGS VEVRIDPRPT PGMLERIEAR
AHQAASASLR RLFHPESVAV IGAGRAPGGV GHRILRNLLQ GGFPGPVYPI NPHARQICGL
PVYANVGSVP GPIDLAVIAT PARTVPEIAR DCAGHGVRNV VVVTSGFAET GGTSAQDELL
RICREAGMRL VGPNCLGIVN TAARLNAGFL PHPPAPGRLA LMSQSGAVAV ALIDRANHLE
IGISSFASVG NKADVSGNDL LEYWEDDPAT DVITLYLESF GNPRRFGRIA RRVSRRKPII
AIKSGRGGSG ERAVRSHTAA AATPDVAVDA LLKASGVIRV ETVRDMLDTA RLLATQPLPQ
GRRVAIVGNS GGPQALAADA CEQRDLLVPE LAPVTRGRLR SRLPVAAAVA NPVDLTAGGS
AQELAFAIET VLADPGIDTV MVVYTPPFGS GLGRTRQAIA RAAMSAGKTV TACISGHDGL
LDGRVPCYAF PEQAVQALRH AVDYASWRAA PQAPPADPRP ADTTARGIVA ADLECHSGGR
WLDYGTAARL LGCYGIQMAE SIEADGPDSA AAAAVTIGPP VVLKATGPDL VHKSDVGGVR
VGLGAPDEVS RAYREMAGMI GPAMTGAIVQ PMIEAGVEII IGGVAHEAFG PMLMVGMGGV
TAELMADRSF RVPPLGDQDA AAMIAELRCA PLLTGYRGRP RADVAALREQ ITGVGRLLDD
LPEVAELDLN PVIVTPAGAV AVDVRVRLAP AAPPPSLFRR RLR
|
|---|
| |