Gene Sros_4548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4548 
Symbol 
ID8667842 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp5065729 
End bp5067117 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content67% 
IMG OID 
Productcytochrome bd ubiquinol oxidase (subunit I) 
Protein accessionYP_003340155 
Protein GI271965959 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.473374 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.198321 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGTCT TGGACCTGTC TCGTTGGCAG TTCGGCATAA CGACCGTCTA CCATTTTCTG 
TTCGTGCCGC TGACGATCGG CCTGTCGATC ATCGTTGCCG GATTCCAGAC GGCCTGGCAC
CGCACCGGGA AGCCCGCCTA CCTGCGGCTG ACCAAGTTCT GGGGCAAACT CTTCCTGATC
AACTTCGCGA TGGGCGTCGT CACCGGCATC GTGCAGGAGT TCCAGTTCGG GATGAACTGG
AGCGACTACT CACGCTTCGT CGGCGACGTC TTCGGTGCCC CGCTGGCCAT GGAAGGTCTC
ATGGCCTTCT TCCTGGAGTC CACCTTCCTG GGTCTGTGGA TCTTCGGTTG GGACAAGCTG
TCACCGAGGC TCCACCTGGC GACGATCTGG ATCGCCGCGA TCGGCACGAA CCTCTCCGCC
TACTTCATCC TGGCGGCCAA CTCCTGGATG CAGCATCCGG TCGGCTACCG GCTCAACCCC
GTCACCGGCC GGGCCGAGCT GACCGACATC TGGGCGGTGC TCACCAACTC CACGACCCTG
GTGACGTTCC CGCACGTGAT CTTCGGGGCG TTCGTCACCG CCGGGGCGTT CGTCGCGGGG
GTGAGCGCCT GGCACCTGCT GCGCAAGAAG AACGTCGAGC TGTTCCGCGT CTCCGCGCGC
ACGGCGATGA CCGTCACCCT GGTCGCCTCC ATCGGAGTCG CCCTGTCGGG CCACTGGCAG
GCCCAGATCA TGACCGAGCA GCAGCCGATG AAGATGGCCG CCGCCGAGGC GCTGTGGGAG
GACGAGACCT CCGCCGGCTT CTCGCTGTTC GCCGTCGGCG ACGTCGAGAA CGGCCGCAAC
CACATCAACC TGCAGATCCC GTACGGCCTG AGCCTGCTGT CCACCAACAC GCTGGACGGC
CGCGTCGAGG GGGTCAACGA CATCCAGGCC CGTTACGAGG CCACCTACGG CCCCGGGGAC
TACACGCCCG TCGTGGGCGT CGCCTACTGG TCCTTCCGTC TCATGATCGG CTTCGGGATG
CTGGCCGCGC TGCTCGCGCT CGCCGGCCTC TGGGCCACCC GGCGCGGCCG GCTGCCGGAC
AACCCGTGGT TCCACCGGCT GGCGATCCTG GGCATCGGCC TGCCGTTCCT GGCCAACTCG
ATGGGATGGA TCTTCACCGA GATGGGCCGC CAGCCGTGGA CCGTCTTCGG GATCATGCGT
ACCGCGGCCG CGGTCTCACC CGGCGTGGAC GTCACCGAGG TCGCCATCAC CCTGGTCGGA
TTCACCCTGG TCTACGCGGT GCTCGCGGTC GTCGAGATCC GGCTGCTGCT GAAGTTCATC
CGGATCGGCC CCGACGCCGA AGGCGAGCCC GGCCGGCCCA CCGACACCGT TCCCGTCCTG
TCCTACTGA
 
Protein sequence
MDVLDLSRWQ FGITTVYHFL FVPLTIGLSI IVAGFQTAWH RTGKPAYLRL TKFWGKLFLI 
NFAMGVVTGI VQEFQFGMNW SDYSRFVGDV FGAPLAMEGL MAFFLESTFL GLWIFGWDKL
SPRLHLATIW IAAIGTNLSA YFILAANSWM QHPVGYRLNP VTGRAELTDI WAVLTNSTTL
VTFPHVIFGA FVTAGAFVAG VSAWHLLRKK NVELFRVSAR TAMTVTLVAS IGVALSGHWQ
AQIMTEQQPM KMAAAEALWE DETSAGFSLF AVGDVENGRN HINLQIPYGL SLLSTNTLDG
RVEGVNDIQA RYEATYGPGD YTPVVGVAYW SFRLMIGFGM LAALLALAGL WATRRGRLPD
NPWFHRLAIL GIGLPFLANS MGWIFTEMGR QPWTVFGIMR TAAAVSPGVD VTEVAITLVG
FTLVYAVLAV VEIRLLLKFI RIGPDAEGEP GRPTDTVPVL SY