Gene Sros_4433 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4433 
Symbol 
ID8667727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4947660 
End bp4948259 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content66% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003340046 
Protein GI271965850 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.304497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00999637 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCGACG CCAAAAAACC CAATCCCGCC CGCCGCAACG AGCGATCACG ACACGCGATC 
CTCGACGCCG CCCGCGAACT GATCCGCGAA GTGGGATACG CCAAGGTCTC GATCGAAGCG
ATCGCCGCCC GCGCGGGCGT GGGCAAACAG ACCATCTACC GATGGTGGCC CTCCAAAGGA
GCCGTGATCT TCGACTCCTT CCTCGCCCTC AGCGACAACC CCGAGCAAGA GGGAATGGCA
CTGCCCGACA CAGGCGACAT CGAAGCCGAC CTCAAACTCG TCATGCGCGC GACAGCGGCC
GAGTTCGCCG ACCCGGACTT CGAAGCCCCG ATCCGGGCAC TCAACTCAGA GATCATCAGC
AATCCCGACC TCGCCGCCCA ATACCGGGAC AGACTCGCCC GCCCCGTACA GGACGCCAAG
AAAGCCCGGC TACGCAGCGC ACAACAGGCA GGCCAACTCG CCCCGGACGC CGACCTCGAC
CTGCTCCTCG ACGTCCTCTA CGCCCCCCTC CACCAGCGCT GGCTGCACCG CTCGGGCCCA
CTCACCGCCG AATACGCCGA CGCTCTCGTC GACATCACAC TCAAAGCCTT CCGCCCCTGA
 
Protein sequence
MPDAKKPNPA RRNERSRHAI LDAARELIRE VGYAKVSIEA IAARAGVGKQ TIYRWWPSKG 
AVIFDSFLAL SDNPEQEGMA LPDTGDIEAD LKLVMRATAA EFADPDFEAP IRALNSEIIS
NPDLAAQYRD RLARPVQDAK KARLRSAQQA GQLAPDADLD LLLDVLYAPL HQRWLHRSGP
LTAEYADALV DITLKAFRP