Gene Sros_4348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4348 
Symbol 
ID8667642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4855802 
End bp4856464 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003339976 
Protein GI271965780 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.457106 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.449633 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAC CTTCCTACCT CAACACCACC CGGACTTCCT ATGACACCGT CGCCGTCACC 
TACGCGGAAC TCTTTCGCAA CGCCCTCGAC GGGCTGCCGT TGGAGCGTGG ACTGCTCACC
GCGTTCGCCG AACTGGTCCA GGCCGCAGGT GGAGGCCCAG TGGCCGACCT CGGTTGTGGC
CCCGGCATGG GGACTGCCTT CCTGCACTCT CTCGGACTGG ACGTCTCCGG CACGGATCTG
TCGCCGACGA TGATCGAGCT GGCCCGCAAG GAGTACCCGG ACATCCGGTT CGACGAGGGT
TCGATGACCG AGCTGGACCT GCCGGACGGA GGCCTCGCGG GCGCCGTCTC CTGGTACTCC
ATCATTCACA CGCCGCCGGA GCGACTGCCG GTGGTGTTCG CCGAGTTCGA CCGGGTACTG
GCACCGGGCG GCTACCTGTT GCTCGCGTTC CAGGCGTCCC GCGAGGGGGC GTCGCACGCG
GCTGAGCCGT TCGACCACAA GGTGACGTTG GCGTACCGGT GGCCGATCGA CGGTGTGGCC
GAGCTGGCGC GCGAGGCGGG GTTCGTCGAA GTGGCCCGGT TGTTGCGCGA GCGGGAGGAG
ACCGAGAGGT TCGAGGCCGG CCATCTGCTG GTCCGTAAAC CGGCGAACCC CGAGAAAGCG
TGA
 
Protein sequence
MTEPSYLNTT RTSYDTVAVT YAELFRNALD GLPLERGLLT AFAELVQAAG GGPVADLGCG 
PGMGTAFLHS LGLDVSGTDL SPTMIELARK EYPDIRFDEG SMTELDLPDG GLAGAVSWYS
IIHTPPERLP VVFAEFDRVL APGGYLLLAF QASREGASHA AEPFDHKVTL AYRWPIDGVA
ELAREAGFVE VARLLREREE TERFEAGHLL VRKPANPEKA