| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4341 |
|---|
| Symbol | |
|---|
| ID | 8667635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 4848675 |
|---|
| End bp | 4849307 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | putative transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003339970 |
|---|
| Protein GI | 271965774 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.13823 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.831003 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATG TCAAGCGGAC GGGCAAGCGG GCGCAGAAGG CGCAGGAGAC GCGCCGGCGC
ATCCTCGCGG CGGCACTGGA GCTGTTCGTG CAGGACGGAT ACGGTGCGAC GAATCTCCAG
GACGTCGCCG ACAGAGCCGG GGTCGCGGTA CAGACGATCT ACTTCGTCTT CGGCAACAAG
CGCGCCCTGC TGAAGGAGCT GGTCGATGTC ACGATCGCGG GTGACGACGA GCCGGTGGCC
ACGATGGACC GGCCGTGGTA CGCCGCCGCG CTGGCCGCCG GCACCGCCCG GGACATGCTG
TGCGCCTACG TCGCCGGCAC GAGCGTGGTT CTGGAGCGGG TCGCGCCGAT CGGCCGGGTC
CTGGAGGCGG CGGTCGCGAG CGATCCCGAG GTCGCCGCCC TGTGGCCGCA CGACGTCGAT
CCGCGGTACG TCGTGCAGCA GGGGGCGGCC GGGGTGCTGG TCGGCAAGCC GGGCGCCCGG
ATGGGGGTGT CGGCGGAGGA GGCCGCCGAT CTGCTGTACG GCCTGCTCAG CCCCGAGCTG
TATCTGCTGT TCGTGCAGGA GCGCGGCTGG CCGCGCGAGC GCTGGGAGCG GTGGGTCGGC
GAGACCCTGT GCGCCCAGCT CTGCGCGGAT TAG
|
|---|
| Protein sequence | MSDVKRTGKR AQKAQETRRR ILAAALELFV QDGYGATNLQ DVADRAGVAV QTIYFVFGNK
RALLKELVDV TIAGDDEPVA TMDRPWYAAA LAAGTARDML CAYVAGTSVV LERVAPIGRV
LEAAVASDPE VAALWPHDVD PRYVVQQGAA GVLVGKPGAR MGVSAEEAAD LLYGLLSPEL
YLLFVQERGW PRERWERWVG ETLCAQLCAD
|
|---|
| |