Gene Sros_4298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4298 
Symbol 
ID8667592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4802725 
End bp4803960 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content65% 
IMG OID 
ProductUDP-N-acetylmuramyl tripeptide synthase-like protein 
Protein accessionYP_003339930 
Protein GI271965734 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGTGCCG AGACGATTCT GGGTGCCCTG CGGTTGCGTT TCGCCGTCTT CTCCGGGCGC 
GTGGCGGCCT GGTATTACTG CCGCACGTCG AAACCGGGCG GCGGGGTGAT AGCCGGAAGA
GTGACGTTGG CACTCGCGCC CGACGCCCTG GGCAGACTGA CGGCTTCGAG GAACGTCGTT
GTGGTCAGCG GAACCAATGG CAAGACCACG ACGACCAGGA TGATCGCTGA AATGCTCAGA
TCGGTTGGCC GGATAGCCAG CAACGACACG GGAGCCAACA TGCCCGCCGG GCTTGTCACG
GCGATAATCC AGGACAGGCC GTTCGACTTC GCGGTGCTCG AGGTCGACGA GCGCTACTTA
CCCGGGGTCT GCGCCGAAAC CAGTCCGGAA GTGGTTGTGC TCCTCAATCT CAGTCGCGAC
CAGCTCGACA GGAATCCGGA GCCCTCACTC GTCGCCGAGG CCTGGCGGAG GATGTCCAGC
GATGTGACGT CGCACGTCGT CGCCAACTGC GACGACCCCC ACATTGTCTG GGCGGTCTCC
GGCTTTCCGC AGGTCACCTG GGTATCCATG GGAGACGAAT GGCGTGATTC GTGGTGGTGC
CCGTCCTGCA GCCAGGCTCT GACCCGCAGT TCCTCCCGCC ACTGGGCCTG TCGTGGTTGC
CCGCTGGAAC GCCCCGTCCC CCAGTGGTCG GCCGGAGAAC GCTCCGTGAC CTACCTGCCC
GGAGCCGAAA CCTTCGATCT CAGGCTCCGC CTGCCCGGAC GTGTCAACGT CGCCAACGCC
GCCATCGCGC TGGCCGTGAC CACCACGCTC GAACAGCCCG CCACAACGAT GGCGGCGGGT
CTGGCCGAGG TCAGGTCGGT AGCCGGGCGC TACCAGGTGC TGGAAACTTT TGGACGGCAG
ATACGGTTGC TGCTGGCCAA GAACCCCGCG AGCTGGACCG AGATCTTCCA CGCGATCGAG
CGGGCACCGG GCGTGTTGAT CATGCTCAAC GCCCGGGAGC TCGACGGCCA GGACACTTCC
TGGATCTGGG ACGTGGACTT CCGGCGGCTG AGGGGGCGGA CCGTGCTGGT GAGCGGGGAG
CGCCGGCTCG ATCTCGCGGT GCGTCTGGAC GTGGCGGAGG TGGAGTTCAA GCTCGTCGAC
TCCCTGCAGG ACGCTTGCGC CTTGGCACCG ATCGGCATTC TCGAAGTGGT TGCCAATTAC
ACGGCGTTCC TCGACCTGAT CCGGCAGTTC AAGTAG
 
Protein sequence
MRAETILGAL RLRFAVFSGR VAAWYYCRTS KPGGGVIAGR VTLALAPDAL GRLTASRNVV 
VVSGTNGKTT TTRMIAEMLR SVGRIASNDT GANMPAGLVT AIIQDRPFDF AVLEVDERYL
PGVCAETSPE VVVLLNLSRD QLDRNPEPSL VAEAWRRMSS DVTSHVVANC DDPHIVWAVS
GFPQVTWVSM GDEWRDSWWC PSCSQALTRS SSRHWACRGC PLERPVPQWS AGERSVTYLP
GAETFDLRLR LPGRVNVANA AIALAVTTTL EQPATTMAAG LAEVRSVAGR YQVLETFGRQ
IRLLLAKNPA SWTEIFHAIE RAPGVLIMLN ARELDGQDTS WIWDVDFRRL RGRTVLVSGE
RRLDLAVRLD VAEVEFKLVD SLQDACALAP IGILEVVANY TAFLDLIRQF K