Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4292 |
Symbol | |
ID | 8667586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 4792409 |
End bp | 4793995 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | Alpha-amylase A precursor (1,4-alpha-D-glucan glucanohydrolase) |
Protein accession | YP_003339925 |
Protein GI | 271965729 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACGAA CGAGACCGCC TTTGGGCCGC AGGATCCGTA ATGTCCTCTT CGCCGTCGCG ATCGCCGCGT GCGGTGTCAC CCCGATGACC GTCACGGTCG CCACGCCTCT CGTGAACGCC GCAGCCACGC TGAACAACAG CGAGGTGACG GCCAGCCTGT GGGAGTGGAA CTGGACGTCC GTCTCGGCTG CCTGTACCGA TCATCTTGGC CCCGCCGGGT TCGGCGCGGT CCAGGTCGCG CCGCCGCAGG AGTCGGTCAG CCTCCCCAAC AGCAAAGACG GGGTGCACCC GTGGTACGAG GTGTACCAGC CGGTCTCCTA CAAGCTCGAA AGCCGGTTCG GTAACCGCCG GCAGTTCGCC GACATGGTCA CCGCGTGCCA CAACGCGGGT GTCCGCGTGT ACGTGGACGC GGTCGTGAAC CACATGGCGG GCACGGACAA CCCCGGCGGC GTAACCGGCT ACGCCGGAAC GTCCTTCACC GGTTACGGCT ACCCGGCCGT CCCGTACGGG CACGGCGACT TCCACCACCC GGGCGACAAC TGCCCGACCG GCGGCGGGAT CGACGACTGG AACAACGAGT CCCAGGTGAC GAGCTGTGAG CTGCTGGCGC TGTCGGACCT GTACACCGAG AAGGAGGAGG TCCGCACCAA GATCGCCGGG TACCTGAACG ACCTGATCGG GCTCGGCGTG GACGGCTTCC GCGTCGACGC GGTCAAGCAC ATGAAGAAGC CCGACTTCGC GGCGATCCTC GGCAAGCTGA ACAACACCGT CGCGGAGAAC AAGCGCCCGT ACATCGCCCA GGAGATCTTC GACGGGGCCG GCAACGACGC CCTGAAGGCG CGGGCGTTCA TCGGCAACGG CGACGTCCTG GACTTCGCCT ACGCCAAGGG CGTCAAGGCC CAGTTCCAGG GTTCGATCTC CAACCTCGGG AGCATCGGGA GCTGGAACCT GGACGCGCCC AGCGCCAACG TCTTCGCCAT GGTCACCAAC CACGACCTGG AGCGCGACGG AGTCGTGCTG TCCTACAAGA ACGGCAACGA CTACAAGCTC GCCAACTACT TCGTGCTGGC CTACCCGCAC GGCAAGCCGT CGGTCTACGA CAGCTTCACC TGGTCCGACC GCAACCAGTC CCCGCCGGCC GACGGCAGCG GGTTCGTCAC CGACACCACC TGCGGGAGCA GCTGGAACTG CCTGACCCGG TCCACCGGGA TCAAGGGCAT GGTCGGCTGG GCCAACGCCG CCAGGTCCGT CAAGTCCGTC TCGGACTTCA AGGCCGTCAA CAGCAACGTG ATCGGCTTCC ACCGCGGTGA CCGCGCCTGG ATCGGCATCA ACGACTCCGG CAGCGACAGC ACCGCCGAGT TCACGACCGG CCTGGCCGAC GGCGACTACT GCGACGTCAT CTCCGGCGCC GCCACCACCA CCGGCTGCAC CGGCACCGAG GTCACCGTGT CCGGCGGCAG GGCCACCGTC AAGATCCCCG CCAACGACGC GGTCGCCATC CACGTCAACG CCAGGGCGGA CACCACCAGG ATCGCGACGA CCTTCGACGT CACCGCCTCC CCGGCGGCGG TCACCGGAGC ACGCTGA
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Protein sequence | MERTRPPLGR RIRNVLFAVA IAACGVTPMT VTVATPLVNA AATLNNSEVT ASLWEWNWTS VSAACTDHLG PAGFGAVQVA PPQESVSLPN SKDGVHPWYE VYQPVSYKLE SRFGNRRQFA DMVTACHNAG VRVYVDAVVN HMAGTDNPGG VTGYAGTSFT GYGYPAVPYG HGDFHHPGDN CPTGGGIDDW NNESQVTSCE LLALSDLYTE KEEVRTKIAG YLNDLIGLGV DGFRVDAVKH MKKPDFAAIL GKLNNTVAEN KRPYIAQEIF DGAGNDALKA RAFIGNGDVL DFAYAKGVKA QFQGSISNLG SIGSWNLDAP SANVFAMVTN HDLERDGVVL SYKNGNDYKL ANYFVLAYPH GKPSVYDSFT WSDRNQSPPA DGSGFVTDTT CGSSWNCLTR STGIKGMVGW ANAARSVKSV SDFKAVNSNV IGFHRGDRAW IGINDSGSDS TAEFTTGLAD GDYCDVISGA ATTTGCTGTE VTVSGGRATV KIPANDAVAI HVNARADTTR IATTFDVTAS PAAVTGAR
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