Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4222 |
Symbol | |
ID | 8667516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 4704992 |
End bp | 4706290 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | major facilitator transporter |
Protein accession | YP_003339867 |
Protein GI | 271965671 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.399211 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00102981 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTTCTAC ACATCCGGAA GACAGGAGTG CAGAAGGTGG CCGGACTCGG CAGGAACTTC AACACGTTGT GGGCGGCCAC CACCGTCTCC AACGTCGGCG ACGGCATAGC GGCGGCCGCC GCGCCGTTGA TGGTCGCCTC GGTCACCGAT GATCCGGTGC TGGTCGGCCT GGCCGTGTTC GTCCAGCAAC TACCCTGGGT ACTGTTCTCG CTGGTCAGCG GCGTCTTCGT GGATCGCCTC GACCGCCGGC GGCTGATCGT GGTGGTCAAC GTGCTCCGCG GTCTGGTCGT GGGCGTGCTG GCTCTGGCCG TGTGGCGGGA CGTGGCGACG ATCCCGGTCA TCTACGCCGC CGGGTTCCTG CTCGGCGTGT GCGAGACCCT CGGTGACAAC GCCTCGGGGA CGCTCGTCCC GATGGTCGTG AAGTCGGAGG ACCTCCCCCG TGCCAACGCG CGCATGCACG CTGTCTTCTT CGCGGTCAAC CAGTTCGCCG CGCCACCGCT GGGCGCCGCC CTGTTCGTGA TGGCGGCGGC GCTGCCGTTC GGGATCAACG CCGCGACGTT CGTGCTGGCG GCCGTACTGA TCTCCACCCT GCGCGGGATA CGGCAGAGCG CTCCGGCCGA GCGGCGGTCC GTGCGCGCCG ACATCGGCGA GGGCATGCGC TGGCTCTGGA ACCACTCCGC GATCCGGATG CTCTCCCTCG CGCTGTGCCT GATGAACGTC ACGCTCATCG CGGGCTTCTC GATCCTCGTG CTCTACAGCC GTGACCGGCT CGGGCTCAAC GAATACGGCT ACGGCGTTCT CATCACGGCG TCCGCAGCCG GCTCGCTGGT CGGTGTGATG GTCGCCCCTC GTCTCCAGGC ACGGTTCTCC GACTCGCTGC TTCTCCGGGC CGGCCTGGTC ATCGAGACGC TGACGCACGT CGGGCTGGCG CTCGCCACCA CGGTGTGGGT CGCCGGGCCC GTCCTGATCG CCTTCGGCGT CCACAGCTCG ATCTTCGGCG CGGTCAGCGT CACGCTGCGC CAGCGGGCCG TGCCCGACGA GCTGCGGGGC CGCGTCCAGA GCGTGTACAT GATGTTCGCC GTCGGCGGCT CCGCGCTGGG AGCCCTGGCC GGCGGGCCCA TCGCCCGCTG GACCGGCATC ACCGGCCCCT TCTGGGCGTC GGCGGTGGTG ATGGCCGTGC TCACGGCCGT GGCCTGGCGC TTCTTCGGCC GCCGGTTCGT CGCCTCCGGC GCAGTCGCCC CGATCGACGA CGACGGCTCC CGGGACCATC CGGGTGAGCG GGTCGCCCTC GACCGTTAG
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Protein sequence | MLLHIRKTGV QKVAGLGRNF NTLWAATTVS NVGDGIAAAA APLMVASVTD DPVLVGLAVF VQQLPWVLFS LVSGVFVDRL DRRRLIVVVN VLRGLVVGVL ALAVWRDVAT IPVIYAAGFL LGVCETLGDN ASGTLVPMVV KSEDLPRANA RMHAVFFAVN QFAAPPLGAA LFVMAAALPF GINAATFVLA AVLISTLRGI RQSAPAERRS VRADIGEGMR WLWNHSAIRM LSLALCLMNV TLIAGFSILV LYSRDRLGLN EYGYGVLITA SAAGSLVGVM VAPRLQARFS DSLLLRAGLV IETLTHVGLA LATTVWVAGP VLIAFGVHSS IFGAVSVTLR QRAVPDELRG RVQSVYMMFA VGGSALGALA GGPIARWTGI TGPFWASAVV MAVLTAVAWR FFGRRFVASG AVAPIDDDGS RDHPGERVAL DR
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