| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4205 |
|---|
| Symbol | |
|---|
| ID | 8667499 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 4683091 |
|---|
| End bp | 4685982 |
|---|
| Gene Length | 2892 bp |
|---|
| Protein Length | 963 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | ATPase-like protein |
|---|
| Protein accession | YP_003339850 |
|---|
| Protein GI | 271965654 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.181289 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00519851 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGG ACGGACGTAG GGGCGTGGGC CGGACGGTCT CTCCGGTCCT GGTCGGGCGT
GATGCGGAGC TGGCACGGCT GGCGGCGGCG GTGGCCGCGC GGCCTTCGGT GGTCGTGGTC
GAGGGCGAGG CGGGCATCGG CAAGTCCCGG CTGGTCGCGG AGCTGGCCGC GCGGCCGGAG
ATGGCGGGGC TGCGATTTCT GAGCGGCGGG TGCAGCCAGA TCAGGGAGCC GTTCCCGCTC
GGGCCGCTCG TCGAGGCGCT GCGGTCCAGT GGCGGCGACC TGGCCGGGGT GGCGCTGTCG
CCGGTGGCCG GTGCGCTGAG ATCCCTGTTT CCCGAGCTGG CGGACGTCCT TCCCGGAGCG
CCCGGACCGC TGGACGATCG GGCGGCCGAG CGGCACCGGC TGTTCCGCGG ACTGGCCGCG
GTGCTGGCCG CGCTCGGTCC CGCCGTACTC GTGGTCGAGG ATCTGCACTG GGCCGACGAG
CAGACCGTCG AGTTCCTGGC GTACCTGCTG GCGAATCCGC CGGGTGCGCT GTCGGTCGTG
CTGACCTATC GGGGCGAGGA GGCGCCGGCC GGGGTACAGG CGCTGACCGC GCGCCCGGCC
GACACGATCA TCCATGAGCA CATCGCGCTG GCGACGCTGG ACGAGACGCA GACCCGCGCG
CTCGCGGCCG CGATCCTGGG CAGTGAGGAG GTCTCCGCAG AGTTCGCCGG GCACCTGTGC
ACGCGGGCCT CCGGCCTGCC GCTGGCGATC CAGGAACTGC TGGCGCTGCT GCGGTCACGT
GGGGCGCTGA TCCGGTGGGA GGGCGGCTGG GCACGCCGCG CCCTCGACGC GCTGGACGTG
CCGGTGGGGG TGCGGGCGTC GGTGCAGGAG CGGGTGGGAC GGCTGTCACC CGCGGCGAGG
GGGGTGGCGG AGGCGGCCGC GGCGCTTCAG CTGGCCTCGC CCGTCGCGGT GTTGACCGGC
GTCACCGGCC TGTCCCCGGC GGAGGCGGCC GACGGGGTGG ACGAGGTGCT GGACTCCGGC
CTGTTCGTCG AGCGGGACGG GGTGGTGCGA TTCCGGCACG TGCTGGCGGC CCAGGCGGTC
CACGAGGGAA TCTCACTGGG GCGCAGGCAA GCGTTGCACG CCGCCGCCGC GACCGCCGTG
CGGGACCTGC GCCCGGTGCC CCTGGGGCGG GTGGCGTACC ACCTCCGGCA GGCCGGTCGC
CTCGGGGACT GGGTGGACGC CGCCGAGAGC GCCGCCGACC AGGCCTTCGC GCTGGGTGAC
GACGCCGAGG TGGCACGGCT CCTGGAGGAC GTGCTGCGCC ACGCGGATCT GGCGCCCGAG
CACCGGGCGG CCCTGGCGAT CAGGCTGGGG TGGGCCGCCT CGGAGTTGTT GCACCTGCCG
GACGTCGGCG ACCTGCTCGC CGAGGCGCTC GACAAAGCCC CTCCCGGGCC CGTCCGCGGC
GAGCTGCGGT TCCTGCTGGG GATGCAGCTC GAAGTGACCC GGACGGACCC GGCGCGCAGG
TATCGGATGT TCACCGACGC CCTGGAGGAA CTGGCCGAGC GGCCGGAGCT GGCGGCCTGG
ACCATGGTGG CCCTGGCGTT GCCGGCCACC ATGGACGTGC CCTCCCAAGA GCGCCTGGGG
TGGTTGGAGC GCGCCCTGGA GACGCTGCCC GAGGTCGGTG ACCCCGCGAC CCGTCTCCTC
GTGCTGAGCA AGGTCGCGAT GGTGTTCACC GTGGTCGGCG ATCCGCGCTG GGCCGAGCTG
ACCGACCGCG TCGTGCGGGA GACGGGCGGC TACGCCGGTC CCCGCAGGGA GGTCTCCGCC
TATCGCTCCA TCGGCGACGA GGCCTGTTTC AGCGGACATC ACGAGGTGGC GCTCCGACTG
CTGACCAAGG CGCTGGAGAG TGCGGCGAGC GCTGACGTCA CCGGCGGCAT GGAGTTCCGC
TGTCGCGCCT CGATGACGAT GGTGGCCTAT TGCCGGGGCA CCTGGGACGG GCTGGGCGAG
GAGGTCGAGG CGCTGCGTCA CGGGCGCAGT GACCGCCCGG TCGAAGTGAA CCTCCTGGAT
GCCGTGGCGG CCTGCCTGTC GCCCGCCCCG GGCCGTATGG ACGCCGCTCA GGATCTCCTG
CGTGAAGTCG TCCAGCGGGT GGGGGCCATG GGAGACGTCG ATCTGCTCCC GTTTCCGGTG
AGCATGCTGC TGCGGGTGGC CACCGCCCGT GGTGAGGCCG CCGCAGCGAT CGCGGGGACT
TCGGAGGCCG TCGCCCTGTG GGAGGCCAAC AGCTTCTGGC CGGTGGGGGT CCGGGCGGTT
CCCGCGCTGG TCGAGGCGTT GCTGGCAGCG GGCAGGCCGG CGGAGGCGGC CGAGGTGGTG
GTCCGGTACG AGTCCCGGCT GCTGGGGCTG GACGCGCCGC TGGCTCCGGC GGGGCTGCGG
CAGGCCCGCG GGCTCATGGC CGCCGCGGAG CAGCGGTGGC GCGAGGCCGC GGAGCACTTC
ACGGCCGCCG CCGCCGACTT CCGGCGGCTA CCGGCCCCCT ACGAGGCGGC CCATGCGGAC
GAGCAGGCCG CGGCCTGCCT CTTCGCTCTC GGCGACCCCG CCGCGGAACC CACCCTCAAG
GCGGCCATCA CCGTGTACGG CGGGATGGGC GCGCGATGGG ACCTGGATCG GGCCACCCGG
CTGGCCCGGC GATGGGGCCT GCGCCCAGCT CCTCCCGCCC CGTCGCGCGA CGGGGCGAAC
GACTCCCTGT CGGCACGGCA ACAGCAGGTG GCGCGGCTGG CCGCGGCGGG ACTCACCAAC
CAGGAGATCG CCAGGGAGAT GTTCCTGTCG CCGAAGACCG TCGACAAGCA TCTCGGCGCG
GCGATGCGCA AGTTCGGCGC GCGTTCGCGC ACGGAGCTCG CCCGCCACCT GGACCACCCC
GCAGGACCTT GA
|
|---|
| Protein sequence | MSADGRRGVG RTVSPVLVGR DAELARLAAA VAARPSVVVV EGEAGIGKSR LVAELAARPE
MAGLRFLSGG CSQIREPFPL GPLVEALRSS GGDLAGVALS PVAGALRSLF PELADVLPGA
PGPLDDRAAE RHRLFRGLAA VLAALGPAVL VVEDLHWADE QTVEFLAYLL ANPPGALSVV
LTYRGEEAPA GVQALTARPA DTIIHEHIAL ATLDETQTRA LAAAILGSEE VSAEFAGHLC
TRASGLPLAI QELLALLRSR GALIRWEGGW ARRALDALDV PVGVRASVQE RVGRLSPAAR
GVAEAAAALQ LASPVAVLTG VTGLSPAEAA DGVDEVLDSG LFVERDGVVR FRHVLAAQAV
HEGISLGRRQ ALHAAAATAV RDLRPVPLGR VAYHLRQAGR LGDWVDAAES AADQAFALGD
DAEVARLLED VLRHADLAPE HRAALAIRLG WAASELLHLP DVGDLLAEAL DKAPPGPVRG
ELRFLLGMQL EVTRTDPARR YRMFTDALEE LAERPELAAW TMVALALPAT MDVPSQERLG
WLERALETLP EVGDPATRLL VLSKVAMVFT VVGDPRWAEL TDRVVRETGG YAGPRREVSA
YRSIGDEACF SGHHEVALRL LTKALESAAS ADVTGGMEFR CRASMTMVAY CRGTWDGLGE
EVEALRHGRS DRPVEVNLLD AVAACLSPAP GRMDAAQDLL REVVQRVGAM GDVDLLPFPV
SMLLRVATAR GEAAAAIAGT SEAVALWEAN SFWPVGVRAV PALVEALLAA GRPAEAAEVV
VRYESRLLGL DAPLAPAGLR QARGLMAAAE QRWREAAEHF TAAAADFRRL PAPYEAAHAD
EQAAACLFAL GDPAAEPTLK AAITVYGGMG ARWDLDRATR LARRWGLRPA PPAPSRDGAN
DSLSARQQQV ARLAAAGLTN QEIAREMFLS PKTVDKHLGA AMRKFGARSR TELARHLDHP
AGP
|
|---|
| |