| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4159 |
|---|
| Symbol | |
|---|
| ID | 8667453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 4627894 |
|---|
| End bp | 4629234 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | sodium/hydrogen exchanger |
|---|
| Protein accession | YP_003339806 |
|---|
| Protein GI | 271965610 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.286241 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCCG TGACCTCGCC GGTCGGCCTG ATCGGCCCGG ACGAGTTACT GATCTTCCTG
ATGCAGGTCG GGCTGCTGCT GCTCTGCGCG CTGCTGCTCG GACGGCTGAC CCAACGACTG
GGGATGTCGG CCATCGTCGG CGAGCTGTGC GCGGGCGTGC TGCTCGGCCC CTCGGTGCTG
GCGCGGGTGG CGCCGGGACT GAGCGACTGG CTGCTGCCCC GCGACACCGC CCAGTTCCAC
ATGCTCGACG CGGTCGGCCA GGTCGGCGTG CTGCTGCTCG TCGGCATCAC CGGCATCCAC
ATCGACCTGC GGCTGGTACG CCGCCGGGGA GTCACCGCGG CCCGGATCAG CCTCGCCGGT
GTGGTCATCC CCCTCGCGCT CGGCGTGGCC GTCGGTCTCC TGCTGCCGGA CTCGCTCGTC
CCCGGCTCCG CCGACCGCAG CACGTTCGCG CTGTTCCTGG GGGTGGCGAT GGGCGTCAGC
GCCATCCCGG TCATCGCCAA GACGCTGATG GAGATGCGCC TGCTGCACCG CAACATCGGG
CAGCTGATCC TGTGCGCGGT CACGGTCGAC GACATCGTCG GCTGGCTGCT GCTGTCCGTC
GTCTCCGCCA TGGCGACCAC GGGGGTACGG GCGGGGAACA TCGCCCTCTC CGTCGGCTAC
GTGGCCGCCG TCGTCGCCGT CGCCGTACTC GCCCGCCCGC TCGTACGGAC CGCGCTGCGG
GCGGCGGAGC GCTCCGACAG CAGGAGGGAC GGCGGCGTGA CGGTCACGCT GGTGGTCATC
CTGGTGGTGC TGGCGGCGGC CGCGACGCAG GCCATGAAGC TGGAGGCGGT GTTCGGCGCC
TTCGTGTGCG GGATCGTGAT CAGCAGTTGC GGCACGCTGA ACCCCGCCCG GCTGGCGCCG
CTGCGCACGA CGGTCCTGTC CTTCCTCGCC CCGCTGTTCT TCGCGACCGC CGGGCTGCGG
ATGGACCTCG CCGCCCTGAC CCAGCCGACG GTCCTGCTGG CCGGCGTCGG CGTGCTGCTC
ACCGCGATCC TGGGCAAGTT CGCGGGAGCC TATCTCGGGG CCCGGCTCAG CCGGCTCGGC
CACTGGGAGG CCCTCGCGCT CGGCGCGGGC ATGAACGCCC GCGGCGTCAT CGAGGTCATC
ATCGCGATGG TCGGTCTCCG GCTGGGCGTG CTGAGCGCCG AGATGTACAC GGTCATCGTG
CTGGTGGCCA TCGTGACGTC GCTGATGGCG CCGCCTATCC TGCGCCTGAC GATGGCACGG
GTCGAGCAGA CCGCCGAGGA GCGGCTGCGC GAGGAGAGCC ACGCGGTCGA AAAGGTCCGC
AACACAGGCG GGACCACCTG A
|
|---|
| Protein sequence | MTPVTSPVGL IGPDELLIFL MQVGLLLLCA LLLGRLTQRL GMSAIVGELC AGVLLGPSVL
ARVAPGLSDW LLPRDTAQFH MLDAVGQVGV LLLVGITGIH IDLRLVRRRG VTAARISLAG
VVIPLALGVA VGLLLPDSLV PGSADRSTFA LFLGVAMGVS AIPVIAKTLM EMRLLHRNIG
QLILCAVTVD DIVGWLLLSV VSAMATTGVR AGNIALSVGY VAAVVAVAVL ARPLVRTALR
AAERSDSRRD GGVTVTLVVI LVVLAAAATQ AMKLEAVFGA FVCGIVISSC GTLNPARLAP
LRTTVLSFLA PLFFATAGLR MDLAALTQPT VLLAGVGVLL TAILGKFAGA YLGARLSRLG
HWEALALGAG MNARGVIEVI IAMVGLRLGV LSAEMYTVIV LVAIVTSLMA PPILRLTMAR
VEQTAEERLR EESHAVEKVR NTGGTT
|
|---|
| |