Gene Sros_4127 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4127 
Symbol 
ID8667421 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4598755 
End bp4599675 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content71% 
IMG OID 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003339774 
Protein GI271965578 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.107679 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0597058 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGACGG CCGGCACGAG CATCGATGAG ATGGCCGGTG AGCGACGCCA GCTGATCAAT 
GTCGCCTACC GGTTGCTCGG TTCACTGGCC GAGTCCGAGG ACGCCGTACA GGAGGCCTAC
GCGCGCTGGT ACGCGCTGCC ACGAAGCCGG CAGGACGAGA TCGTGTCCCC CGGCGCCTGG
CTGACGACGG TGACCAGCCG CATCTGCCTG GACGTGCTCG GCTCGGCGCG GGCCCGGCGT
GAACGCTATG TCGGCGCGTG GTTGCCCGAC CCGCTGCCCG ACCACGCCGA GTGGGACCAC
AGCCATGGCA CCGACCCCGC CGACCAGATG GTCCTGGACG AATCGGTGAC CATGGCCTTC
CTCGTCGTCC TGGAGTCGAT GACACCCGCC GAGCGGGTGG CGTTCGTCCT GCACGACGTC
TTCCGATACC CCTTCGCCGA GATCGCCGAC ATCCTCGGCC GGACCCCTGC GGCCTGCAAG
CAGCTCGCGG CGTCCGGCCG TCGGCGGGTG CGCGTCGCAC AGGCTCCGGT GACGGCGGCC
GGGCAGGCCG ACACGGTGCG GCATGTCAAA GAGGCATGGG AGACCAAGGA CATCGCGGCC
CTCGTCGACC TCCTCGACCC GGCCGCCGTG ATGACCGCCG ACGGCGGCGG CATGGTCGGT
ACCGTCCTAC GCCCGATCGA AGGCGGTGCG CGCATCGCCC AGTACATGGT CGCCATCGCC
GACAAGGCTC CGGGGCTCGA ACTCCTGGAG CGGTCGGTCA GCGGTGTGCC GGGCCTGGTG
GCCCGGCATG CCGGCGCCGT CACGACCGTA GCCTCGTTCG ATGTCGCCGA CGGCCGCGTC
ACCCGGATCT GGGCGGTCCG CAATCCGGAA AAGCTGCGGC CGTGGGTGCG GGAGGGCGGA
CCTGTCCGGC CGATCATGTG A
 
Protein sequence
MGTAGTSIDE MAGERRQLIN VAYRLLGSLA ESEDAVQEAY ARWYALPRSR QDEIVSPGAW 
LTTVTSRICL DVLGSARARR ERYVGAWLPD PLPDHAEWDH SHGTDPADQM VLDESVTMAF
LVVLESMTPA ERVAFVLHDV FRYPFAEIAD ILGRTPAACK QLAASGRRRV RVAQAPVTAA
GQADTVRHVK EAWETKDIAA LVDLLDPAAV MTADGGGMVG TVLRPIEGGA RIAQYMVAIA
DKAPGLELLE RSVSGVPGLV ARHAGAVTTV ASFDVADGRV TRIWAVRNPE KLRPWVREGG
PVRPIM