| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4117 |
|---|
| Symbol | |
|---|
| ID | 8667411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 4575177 |
|---|
| End bp | 4576736 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003339766 |
|---|
| Protein GI | 271965570 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0423597 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0290326 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGACGT TGGTCCGACC TGTCCCGTAC CCCCCGACGA CGGAGCCGGC CCGTGCCGCC
GAGCCGCTCC GGCACGCGCG GCTCGCCGGA CGCGCGGGGC TCACCATGAT CGGGGTCGCC
GTGGCGACCA TGCTGGCCGT CGCCCTCCTC GGGCCGTCCG CGGCGGTGCC CGACCTCGGT
GGCGGTGATC CGCCCTGGTC CTTCCGGGCC GCCCCCTCCG ACACGCTGGT GATCCAGTTG
AGCTGGGCGG CCGTCATCAT CGGCGGGCTG GGCGTGGGTG CCGGGCTGTA CGGGCTGCGC
CGGAGATGGC GTCCGGCGCG AGGGGTCCTT CTCGCCGGCA CGGTGATCGC CGTCCTCACC
CTCACGCTCG TACCGCCCGC CGGATCGACG GACGTGCTCA ACTACGCGGT CTACGGGCGC
ATCGCCGCCC TCGGACACGA CCCGTACGTG CTGACCCCGG CATGGCTGCA CAAGATGGCG
GACCCGGTCG GTGAGCTGGC CCCCCTGGCG TGGCGCAACA CACCCTCGGT GTACGGGCCT
CTGGCGACCT GGGCGCAGAT GGCCGGTTCG TGGCTCGGCG GCGGGACGAT GGCCGGCACC
GTGCTCGCCC TCAAGGTCAT GACAGGCCTG GCGTTCCTGC TGTCCGCGTA CATGCTCGAC
CGGCTGGCGG GACCGGACCG CGACCGGCGC GTCCGCGCCC ACCTGCTGTG GAGCCTCAAC
CCGCTGATGC TGTGGCACGT GGTGCTGGGC GGCCACATCG ACGGCCTGGG AGCGTTCTTC
CTCGTCGCGG CCTTCCTCGC CCTGCGCGGG GGCGGCGTGG TCGCGGGCCT GGCGGCGGGG
GCGCTGCTCG GCGCGGCGGC CGCCGTCAAG GCGCCGTTCA TCCTCGCCGG CGCCGGCCTG
GCCTGGGCGG CCCGCCGGTC GATGACCACT TTCCTGGCAA TGGTGATGGG CGCGTGCACT
GCGCTGGTCG TGGCGTACGC GACGCAGGGC CCGGAGGCCT TCGGGAACCT GGTCGGCAAG
ATCGGTTCCC GCTCGCTGGC CGATCCGTGG CGTGTGATCA CCGACGCGCT GGGCCTGGGC
GCGCGGTCGT CCACCCTGGA GGGGCAGCTC GCCCTCGGTG CCGCCCTCCT CATCGGTCTC
CTGCTGTGCC GGCGGCTCCC TCCGGGACCG CCCGGCCTGG CCTCCGTACG CCCGGCGCTG
GCGTGGTGCC TGTGCTGGCT GCTCACCTCT CCGGTGCAGC ATCCCTGGTA CGACGCCCTG
CTGTTCCCCC TGCTGGCACT CATGCCGGCC GGCCGCCTCG ACGGGCTGCT GATCACCCGC
GGCATCATGA CGAGCCTCAT CTACCTGCCC GGTGCCGTCG GCCTCCTCCA GCTCCAGCCC
ACCGCGCTGA CCCGGTGGAT CGCCGAGACC TACCGCCCGT GGATCGCTCC GCTGGCCGCC
GACCTCCTCA TCCTCTGCGT CATCGCGCTG AGCTTCGCCG GCGCCCTCCG CTCCCGGGCG
CTGCCGCCCG CCGCCGGTGA CTACGATCAT GCGAATGGAC AGCCGCTGCC TGGCCGATGA
|
|---|
| Protein sequence | MPTLVRPVPY PPTTEPARAA EPLRHARLAG RAGLTMIGVA VATMLAVALL GPSAAVPDLG
GGDPPWSFRA APSDTLVIQL SWAAVIIGGL GVGAGLYGLR RRWRPARGVL LAGTVIAVLT
LTLVPPAGST DVLNYAVYGR IAALGHDPYV LTPAWLHKMA DPVGELAPLA WRNTPSVYGP
LATWAQMAGS WLGGGTMAGT VLALKVMTGL AFLLSAYMLD RLAGPDRDRR VRAHLLWSLN
PLMLWHVVLG GHIDGLGAFF LVAAFLALRG GGVVAGLAAG ALLGAAAAVK APFILAGAGL
AWAARRSMTT FLAMVMGACT ALVVAYATQG PEAFGNLVGK IGSRSLADPW RVITDALGLG
ARSSTLEGQL ALGAALLIGL LLCRRLPPGP PGLASVRPAL AWCLCWLLTS PVQHPWYDAL
LFPLLALMPA GRLDGLLITR GIMTSLIYLP GAVGLLQLQP TALTRWIAET YRPWIAPLAA
DLLILCVIAL SFAGALRSRA LPPAAGDYDH ANGQPLPGR
|
|---|
| |