Gene Sros_4086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4086 
Symbol 
ID8667380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4545166 
End bp4545879 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content70% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003339737 
Protein GI271965541 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAAC CCCGGCACGC GGGCCAGGAC GCACGCGCCG ACCGGATCCT CGACGCGGCC 
AAGGACCTGC TGCTGCGCTG GGGATACCGG CGGGTGACGA TTGACGAGAT CGCCAAACAC
GCCGGCGTCG GCAAGGGCAC GGTGTACCTG CACTGGCGCA CGCGCGAGCA GCTGTTCCTC
GCGGTCGGTG CGCGGGAGGC GGTCGCGATG ATCGAGGCGG TGGTGGCCGC GATGCGGGCC
GATCCCGCCC AGATCGCGCT GCACAGGTAC ATGCGCCGGT TCTTCGTGGA GGCGATGCGG
AGGCCCGTGC TGCGGGCCAT CTTCACCAGG GACGACGAGA CGCTGGGCAA GTTCCTGTCC
AGCCCGTCCA GGAAGCCGCT GGAGAGCGCC AAGCTCGTCG CCTCCCGCGA ATACCTGGGC
GTGCTCATCG AGCACCACCT ACTGCGCGAG GGCCTGCGCC CCGAGGAGCT GGACTACTCG
CTGCCGACCA TCGTGTTCGG CTTCTTCGCC ATCGAGCCGC TGCTGCCCCC GGGCATCGAG
CTCGGGCTGG AGGACAAGGC CGATCATCTG GCCGACACCC TGCGCCGGAC GTTCGAGCCC
GCGGCGCCGC TCTCCATGGC GGATCTCGCC GCGGCCGCGG CGAAGGTGAT CGAGATCTTC
GAGCGGCTCG CCCTCGACTA CCGGGACGCG GCCCGCGGGA TCACCGGTGA ATGA
 
Protein sequence
MAEPRHAGQD ARADRILDAA KDLLLRWGYR RVTIDEIAKH AGVGKGTVYL HWRTREQLFL 
AVGAREAVAM IEAVVAAMRA DPAQIALHRY MRRFFVEAMR RPVLRAIFTR DDETLGKFLS
SPSRKPLESA KLVASREYLG VLIEHHLLRE GLRPEELDYS LPTIVFGFFA IEPLLPPGIE
LGLEDKADHL ADTLRRTFEP AAPLSMADLA AAAAKVIEIF ERLALDYRDA ARGITGE