Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_4064 |
Symbol | |
ID | 8667358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 4526203 |
End bp | 4526823 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | |
Product | NUDIX hydrolase |
Protein accession | YP_003339715 |
Protein GI | 271965519 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.305578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.120697 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCCTGC TTCCCCCGAT GGACGAGCTC CGCTCCCGCG TCACCGCGAA CCTGGCAGGG TTCCGGCGGC AGGGGGCTCT CCCCCTCGCC GAAGGCCTGC GGCACGCCGC GGTGACCGTG TGCGTGCTGG AGGACGACGG GCGCGGGCCG TACACGATCG TGATCAGGCG GGGCGCCCAC GGCCGCAACC CCGGGCAGTG GGCACTGCCC GGGGGCAGGC TGGAGGAGGG CGAGGACGCC GTGACGGCGG CGCTGCGGGA GCTGGAGGAG GAGGCCTCGG TCCGGAACGT GGAGGTGGCC GGGCTGCTGG ACGACTTCGT CGCCGACTCC GGATTCGTGA TCACTCCGGT GGTGGCGTTC GGCGGGCGGC AGCGCCCCCG CCGCGACCCC TACGAGGTGG CCTCCGTCCA CCGGGTGCCG CTGGAGCGGT TCCTGGCGCC GGGGGTGCCG CGCTGGCGGA CGGACGAGGA GGGGCGGAGC CTGCTGCAGA TGCCGCTGGG CCCCTCGATC GTGATCCACG CCCCCACCGG GGCGATCCTG TGGCAGTTCG CCGAAGTGGC CCTGAAAGGC CGCGACCTGC GGGTGGCGGG AGTCGCCCAG CCGCACTGGA CACGCCGGTG A
|
Protein sequence | MALLPPMDEL RSRVTANLAG FRRQGALPLA EGLRHAAVTV CVLEDDGRGP YTIVIRRGAH GRNPGQWALP GGRLEEGEDA VTAALRELEE EASVRNVEVA GLLDDFVADS GFVITPVVAF GGRQRPRRDP YEVASVHRVP LERFLAPGVP RWRTDEEGRS LLQMPLGPSI VIHAPTGAIL WQFAEVALKG RDLRVAGVAQ PHWTRR
|
| |