Gene Sros_4053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4053 
Symbol 
ID8667347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4512635 
End bp4513873 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003339704 
Protein GI271965508 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0744833 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCCGGG TGAGTGTCGC GCTCGGATTG AACCGTCCCC TCGTGGTGAG AACCACGCTC 
GTCGGCGACC CCGGCGACCT GCTCGCGCGA CTTCCCGCGG CCGCCCCCTA CGCCTGGATC
AGGCACGGCG AGGGTATGGT GGCCTGGGGA GAGGCCGCAC GGGTGGCTGT GCCACCCGGC
CCCAGGCGTT TCGAGTGGGC TCGTGACTGG CTGTCGGAGA CCTTCGGCGA GGCCCATGTC
GACGACGACG TGGGCGTCCC CGGCTCGGGC CCGGTCGCCT TCGGTTCCTT CACCTTCGAC
CCCGACGCCC AGGGCTCGGT CCTCGTCGTC CCGCGGGTCG TCCTGGCCCG CCGCGACGGC
CGCGCCTGGC TGACCACCCT CGGCGAGGAG CGGCTCGACC TGGTCACCCC GCTCCGCGAC
CCCGGCAGGA TCCGGTACGG CGACGGCAGC CTGACCGCTC CCGAATGGGA GCACGCCGTG
GCGCGGGCCG TCGGGCAGAT CAGGTCCGGG CGCCTGGAGA AGGCCGTGCT CGCCCGCGAC
CTGACCGCCA CGGCGGAGCG GGAGATCGAC GTCCGCCTGC TGCTGTCACG TCTGGCCCGC
CGCTATCCCG GGTGCTACAC CTTCTCCTGC GCCGGCCTGG TCGGCGCCAC CCCCGAGCTG
CTGGTCCGGC ACACCGGCGA GACGATCGAG TCCCTGGTGC TGGCTGGCAC GGCCTCCAGG
GGCACGGACG AGGCCGACGA CATGGCGCGC GGCGCCGCCC TGTTCGCCTC GGAGAAGGAC
CGCTACGAGC ACACCTGCGC GGTGGAGTCG GTCCGGGAGG CGCTGGCCCC GCTCTGCTCC
GAGCTGAAGG TGCCCGAGGA GCCCGAGCTC CTGGTCCTGT CCAACGTCCA GCACCTGGCC
AGCCCGGTGA CCGGGCGCCT GTCGGCCGGG GCCTCGGTCC TGGACGTGGT GGCCGCCATG
CACCCGACGG CCGCCGTCGG CGGGACGCCC ACCGAGACGG CGCTCGGCGT GATCCGCGAG
CTGGAGGGCA TGGACCGCGC CGGTTATGCC GGGCCGGTCG GCTGGATCGA CGCCCGGGGC
GACGGCGAGT GGGGCATCGC GCTGCGCTGC GCCCAGATCG AGGGCCGCCG GGCCCGCCTG
TTCGCCGGCT GCGGCATCAT GGGCGACTCC GCGCCGGCCG CCGAGCTGGC CGAGGCCCAG
GCCAAGCTCC GCGTGATGCA GTACGCCCTG GAGGGCTGA
 
Protein sequence
MFRVSVALGL NRPLVVRTTL VGDPGDLLAR LPAAAPYAWI RHGEGMVAWG EAARVAVPPG 
PRRFEWARDW LSETFGEAHV DDDVGVPGSG PVAFGSFTFD PDAQGSVLVV PRVVLARRDG
RAWLTTLGEE RLDLVTPLRD PGRIRYGDGS LTAPEWEHAV ARAVGQIRSG RLEKAVLARD
LTATAEREID VRLLLSRLAR RYPGCYTFSC AGLVGATPEL LVRHTGETIE SLVLAGTASR
GTDEADDMAR GAALFASEKD RYEHTCAVES VREALAPLCS ELKVPEEPEL LVLSNVQHLA
SPVTGRLSAG ASVLDVVAAM HPTAAVGGTP TETALGVIRE LEGMDRAGYA GPVGWIDARG
DGEWGIALRC AQIEGRRARL FAGCGIMGDS APAAELAEAQ AKLRVMQYAL EG