| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_4048 |
|---|
| Symbol | |
|---|
| ID | 8667342 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 4507489 |
|---|
| End bp | 4508118 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003339699 |
|---|
| Protein GI | 271965503 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.173399 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.000882934 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCGC CGTACCTCAC GCTGGAAGAC GTCGTCGAGC ACGAGATCGA GATCAAGCGG
TCACGGTTCG TCTGCGCGAT CGCCCCGGTG GTCTCGGAGG AGGCGGCCAG GCGGTTCGTG
GCCGAGCGCA GGCGGCTGTA CGGCGACGCC ACGCACAACT GCTCCGCCTA CGTGATCGGC
GGTGACCGGC TGGTCCAGAA GGCCGACGAC GACGGGGAGC CCGGTGGCAC CGCCGGTACC
CCGATGCTGG AGACGCTGCT GCGCCGCGGG CTCGGCGACG TGGTGGCGGT GGTCACGCGC
TACTTCGGCG GGGTGAAGCT GGGCGCGGGC GGCCTCGTCC GGGCCTACGG CTCATCGGTC
GGCAAGACGC TGGACCTCAC GTCCCTGGTC GAGATGGTGC CCGCCAGGGT CATGTCGGTG
ACCGTGGACC ACGTCCTGGC CGGGCGGTTG GAGAACGACC TGCGCATCTC GCCGTACGAG
GTCAGGGAGG TCGTCTACGG CGCCGAGGTC GGCTTCCGGA TCGCGGTGCG GGAGGCCGAC
CTGGCCGCCT TCCCCGGCTG GGTCGCCACG CTGACGGCCG GCCGGGCGGA GGTCGGGACA
GGAGAGACGG TCTATCTCAG GAGTGCCTGA
|
|---|
| Protein sequence | MAAPYLTLED VVEHEIEIKR SRFVCAIAPV VSEEAARRFV AERRRLYGDA THNCSAYVIG
GDRLVQKADD DGEPGGTAGT PMLETLLRRG LGDVVAVVTR YFGGVKLGAG GLVRAYGSSV
GKTLDLTSLV EMVPARVMSV TVDHVLAGRL ENDLRISPYE VREVVYGAEV GFRIAVREAD
LAAFPGWVAT LTAGRAEVGT GETVYLRSA
|
|---|
| |