Gene Sros_4024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4024 
Symbol 
ID8667318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4478838 
End bp4479788 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content75% 
IMG OID 
Productheat shock protein DnaJ domain-containing protein 
Protein accessionYP_003339675 
Protein GI271965479 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.115039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0763204 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCA CGACCCGCGA CTTCTACGAG AGTCTTGGAG TGTCGAGGGA CGCCGGCCAG 
GATGAGATCC AGAGCGCCTA CCGCAAGCTC GCGCGGACCT ACCATCCCGA CGTCAACAAG
GACCCGGGTG CCGAGGATCG TTTCAAGGAG ATCTCGGAGG CCTACAGCGT CCTGTCCGAC
CCCGCGACGC GCCGCCGCTA CGACGCGTTC GGGCCCGACT TCCGCCAGGT GCCCGAAGAC
GTGGACCCGG ACACCTGGGC CCGCGCCAGA GCCGGTCGGG GCGCGCGGGG CAGGCGGCCG
GGAGCCGGGG CCGGGGCCGG TCCGGGCGGG CCGGCGGGTT TCGGGGAGGG CGTCGACTTC
GAGGACCTCC TGGAGGGCCT GTTCTCCGGT AGGGGCGGCG GCCGGGCGGG CCGGGGCTGG
GGGCCGATCC CCGGCGCCGA CCAGGAGGCC GAGATCGAGC TCACCGTGGA GGAGGCCTAC
CGGGGCGGCC GCCGTTCGAT CACCGTGGGC GGCCGCCGGA TCGACGTCAA CATCCCGGCG
GGCGTGACCG ACGGGCAGCG CATCCGGCTG GCGGGGCAGG GCGGCCGGGG CAGTGACGGA
GCCGCCGCCG GAGATCTCTA CCTGATCGTC AGGATCGCGC CGCACCCCCG CTACCGGGTC
GAGGGGCGCG ACATCCGCGT CCAGCTCCCG GTCACCCCGT GGGAGGCGGC GCTGGGCGCG
TCCGTCGCCG TCGACACCCC GGCCGGCGAG GCCAAGGTCA AGGTGCCCGC CGGGAGCTCC
AGCGGCCGGA GGCTGCGGCT GCGCGGCCGG GGGATGCCGA ACCCGCGGGG CACGCCGGGA
GACCTGTTCG CCGAGGTTCG GATCATGGTT CCGGCCGCGC TGTCGGACGA GGAGCGGCGG
CTGTTCGAGC AGCTCGCCGC GGTCTCGACG TTCGACCCGA GGAGGCGGTG A
 
Protein sequence
MATTTRDFYE SLGVSRDAGQ DEIQSAYRKL ARTYHPDVNK DPGAEDRFKE ISEAYSVLSD 
PATRRRYDAF GPDFRQVPED VDPDTWARAR AGRGARGRRP GAGAGAGPGG PAGFGEGVDF
EDLLEGLFSG RGGGRAGRGW GPIPGADQEA EIELTVEEAY RGGRRSITVG GRRIDVNIPA
GVTDGQRIRL AGQGGRGSDG AAAGDLYLIV RIAPHPRYRV EGRDIRVQLP VTPWEAALGA
SVAVDTPAGE AKVKVPAGSS SGRRLRLRGR GMPNPRGTPG DLFAEVRIMV PAALSDEERR
LFEQLAAVST FDPRRR