Gene Sros_4001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_4001 
Symbol 
ID8667295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4456091 
End bp4458577 
Gene Length2487 bp 
Protein Length828 aa 
Translation table11 
GC content72% 
IMG OID 
Productphosphoglucomutase/phosphomannomutase family protein 
Protein accessionYP_003339652 
Protein GI271965456 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.755788 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.793292 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGCG GGGAGGGGAC ACGGCTCCGG CCGATGACCG CCAACCAGCC CAAACCCCTG 
TTGCCCGTGA TCAACCGGCC GATCATGGAG CATGTGCTCC GCCTGCTGAG ACGGCACGGG
CTCACCGAGA CCGTGGTGAC CGTGCAGTTC CTGGCGGCCC TGGTCCGCAA CTACTTCGGC
GACGGCGACG AGCTCGGCAT GAGCCTGTAC TACGCCACCG AGGACACCCC GCTCGGCACC
GCCGGCAGCG TCAAGAACGC CGCCGACAAG CTCCGCGACG ACCGCTTCCT GGTCATCTCC
GGCGACGCGC TCACCGACAT CGACCTGACC GACATGATCC GGTTCCACCG TGAGAACGGC
GCGCTGGTCA CCATCGGGCT CAAACGGGTG CCCAACCCGC TGGAGTTCGG CATCGTCATC
GTCGACGACC ACGGCCGGGT GGAGCGCTTC CTGGAGAAGC CCACCTGGGG CCAGGTCTTC
TCCGACACCG TCAACACCGG CATCTACGTG ATGGAGCCGG AGGTCCTCGA CGAGATAGCC
GCCGGCGTGC CGGTCGACTG GTCGGCGGAC GTCTTCCCCC GCCTGCTGGC GCGCGGCGCC
CCCCTGTACG GCTACGTCGC CGAAGGCTAC TGGGAGGACG TCGGCACCCA CGAGAGCTAC
CTCAGGGCCC AGGCCGACGT GCTGTCCGGC CGGGTCAGGG TGGACACCGA CGCCTTCGAG
GTCTCGCCCG GCGTATGGGT GGCCGAGGGC GCCTCGGTGG ACACCGACGC CGTGCTCAAG
GGCCCGCTCT ACATCGGCGA CTACGCCAAG GTCGAGGCGG GGGCCGAGCT GCGCGAATAC
ACCGTCCTGG GCAGCAACGT GGTGGTCCGC GAGGGCGCCT TCCTGCACCG CGCCGTCGTC
CACGACAACG TCTACGTCGG GCCCCGCGCC CACCTGCGCG GCTGCGTCGT CGGCAAGAAC
ACCGACCTGA TGACCGGCGT CAGGATCGAG GAGAGCGCCG TCGTCGGCGA CGAGTGCATC
ATCGAGGCCG AGGCCTACGT CTCCTCCGGG GTCAAGGTCT ACCCGTTCAA GACCATCGAG
GCCGGGGCGG TGGTCAACAC CAGCGTCATC TGGGAGCCGC GCGGCCAGCG CAACCTGTTC
GGCCCGCGCG GCGTGTCCGG GCTGGTCAAC GTGGAGATCA CCCCCGAGCT GTGCGTACGG
CTGGCCAGCG CCTACGCCAC AACGCTCAAG AAGGGCGCCT CGGTCATCAC CTCCCGCGAC
TCCTCGCGCG CCGCGCGGGC GCTGAAGCGG GCCGTGATCA GCGCCCTGAA CGCCAGCGCG
ATCAACGTGC TCGACCTGGA GGCGGCCCCG CTGCCGGTCA CCCGCTTCCA CACCGCCAGG
GAGAACGCCG TCGGCGGCAT CGCGCTGCGC ACCACCCTGG GGGACCCGCA GAGCGTGGAC
ATCGTCTTCA TGGACGAGCG CGGCGCGGAC CTGTCCCAGG CGGCCCAGCG CAAGCTGGAC
CGGGTCTTCT CCCGGCAGGA GTTCCGCCGG GCCTTCCCCG GCGAGATCGC CGAGCTCAGC
TTCCCCGCCA GGGCCGTCGA GGACTACACC CACGAGCTGC TGCGCTGCGT CGACATGGCC
GGGGTCCGCG ACGCCGACAT GAAGGTCGTG GTGGACTGCG CGGGCGGCAC CTCCTCCCTG
GTGCTCCCCA GCCTCCTCGG CCGGGTGGGG GTGGACGTGC TCACCGTCAA CAACCGGCTG
GACGACGCCT CGCCCACCGA GACCCTCGCC GAGCGCCGGC GTGACCTGCA GCGCCTGTCG
GAGCTCGTCA GCTCCTCCAG GGCGGCCTTC GGGGTGCGGT TCGACCCCGT GGGGGAGCGG
GTCGCGCTCG TCGACGAGAT GGGCCAGCTG ATCAGCGAGG AGCGCGCCCT GCTGGTGGTG
CTGGACCTGG TCGCCGCCGA GCGGCGCGGC GGCCGCGTGG CGCTGCCGGT CACCACCACC
CGCGTGGCCG AGCAGGTCTC CCGCTTCCAC GGGGTGCAGG TCGAATGGAC CTCCACCGCG
ATCGACGCGC TCACCGCCTC CGCCCGGGGC CAGGACATGA TCTTCGCGGC GGACGGGCGG
GGCGGCTTCG TCGTGCCCGA GTTCGGCCCC ACGGTGGACG GCCTGGCGGT GTTCCTGCGC
CTGCTCGGCC TGGTCGCCAG GACCCGGCTG TCGCTCAGCC AGATCGACGC CAGGATCCCC
GAGGCCAAGC TGCTTCGCCG TACCGTCCCG ACCCCCTGGG CGGCCAAGGG GGTGGTGATG
CGCTCGGTGA TCGAGGCCGC CGAGCACCAC CGCATCGACA CCACCGACGG GGTACGGGTG
GTGGCCGAGG ACGGCAGCTG GGCGCTGGTG CTGCCCGACC CGGCCGAGGC CGTCACCCAC
CTGTGGGCCG AGGGGACGGA CGTCGACTCG GCGCAGAGCC TGCTGGAGCA CTGGGCGCGG
GTGGTGGAGG AGGCGGCGGC CACGTGA
 
Protein sequence
MAGGEGTRLR PMTANQPKPL LPVINRPIME HVLRLLRRHG LTETVVTVQF LAALVRNYFG 
DGDELGMSLY YATEDTPLGT AGSVKNAADK LRDDRFLVIS GDALTDIDLT DMIRFHRENG
ALVTIGLKRV PNPLEFGIVI VDDHGRVERF LEKPTWGQVF SDTVNTGIYV MEPEVLDEIA
AGVPVDWSAD VFPRLLARGA PLYGYVAEGY WEDVGTHESY LRAQADVLSG RVRVDTDAFE
VSPGVWVAEG ASVDTDAVLK GPLYIGDYAK VEAGAELREY TVLGSNVVVR EGAFLHRAVV
HDNVYVGPRA HLRGCVVGKN TDLMTGVRIE ESAVVGDECI IEAEAYVSSG VKVYPFKTIE
AGAVVNTSVI WEPRGQRNLF GPRGVSGLVN VEITPELCVR LASAYATTLK KGASVITSRD
SSRAARALKR AVISALNASA INVLDLEAAP LPVTRFHTAR ENAVGGIALR TTLGDPQSVD
IVFMDERGAD LSQAAQRKLD RVFSRQEFRR AFPGEIAELS FPARAVEDYT HELLRCVDMA
GVRDADMKVV VDCAGGTSSL VLPSLLGRVG VDVLTVNNRL DDASPTETLA ERRRDLQRLS
ELVSSSRAAF GVRFDPVGER VALVDEMGQL ISEERALLVV LDLVAAERRG GRVALPVTTT
RVAEQVSRFH GVQVEWTSTA IDALTASARG QDMIFAADGR GGFVVPEFGP TVDGLAVFLR
LLGLVARTRL SLSQIDARIP EAKLLRRTVP TPWAAKGVVM RSVIEAAEHH RIDTTDGVRV
VAEDGSWALV LPDPAEAVTH LWAEGTDVDS AQSLLEHWAR VVEEAAAT