Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3980 |
Symbol | |
ID | 8667274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 4434586 |
End bp | 4435539 |
Gene Length | 954 bp |
Protein Length | 317 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | helix-turn-helix type 11 domain-containing protein |
Protein accession | YP_003339633 |
Protein GI | 271965437 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.26771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGTGCGG CCAGGTTGAT GTCGTTGGTG CTGTTGCTCC AGGCCCGTGG AGGCATGACC GCCACGGAGC TCTCCCGAGA GCTGGAGGTC TCCGAACGGA CCGTCCACCG GGACGTGCTG GCCCTGTCGG AGGCCGGGGT GCCGGTCTAC GCCGACCGCG GCCGGGGCGG GGGATACCGG CTGCTGGACG GATACCGCAC CCGCCTGACG GGGCTGGACC GCGCGGAGGC CGAGGCGCTT TTCCTGTCCG GCGTGCCGGA GGCGCTGCGG GAGATGGGGC TGAGCGGGGT GGCGGCCACG GCGCGGCTGA AGGCCTCGGC CGCGCTGTCG CCCGGCGTGC GCGACGCGCC CGCGACGGCC GCCCAGCGCT TCCACCTGGA CGCCCCCGGC TGGTTCGCGA GCGAGAGGCC GCCTCCGGAG GCGCTGGCGC CGCTGGCCAG GGCCGTGTGG GGCGACCATC CGGTCACCGC GCTCTACCGG GGGGCCGAGC GGACGCTGGA GCCGTACGGG CTCGTGCTCA AGGCCGGTGT CTGGTATCTG GCGACCCGAT CCGCGATCTA CCGGGTGGAC CGCTTCGCCG AGGTCGGGAT CCACTCCGAC CGGCGCTTCG AGCGGGACCG CGGCTTCGAC CTGGCGGCGT TCTGGAGCGG TCGCGCCGCC GAGTTCGCCC GCTCCCTGCT CACCACGCGT GTCACCGTAC GGCTCAGCCC CGCCGGCCAC CGCCTGCTGC CGCACGTGGC CGACCCCGCG GCCCTCGGCG ACGCGCTGGC GTCGGCCGGG GAGCCCGACG GCCAGGGCCG GATCACGCTG TCGCTGCCCG TGGAGTCGCT GGAGGTCGCC TACGCCCAGA TCCTCCGGTT CGGCCCGGAG GCCGAGGTCC TCGACCCGCC CGAGCTCCGC GCCCGCCTGG CCGGAGCCGC CGCGCGGCTG CGGGCCCTGT ACGGCCGGGC CTGA
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Protein sequence | MRAARLMSLV LLLQARGGMT ATELSRELEV SERTVHRDVL ALSEAGVPVY ADRGRGGGYR LLDGYRTRLT GLDRAEAEAL FLSGVPEALR EMGLSGVAAT ARLKASAALS PGVRDAPATA AQRFHLDAPG WFASERPPPE ALAPLARAVW GDHPVTALYR GAERTLEPYG LVLKAGVWYL ATRSAIYRVD RFAEVGIHSD RRFERDRGFD LAAFWSGRAA EFARSLLTTR VTVRLSPAGH RLLPHVADPA ALGDALASAG EPDGQGRITL SLPVESLEVA YAQILRFGPE AEVLDPPELR ARLAGAAARL RALYGRA
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