Gene Sros_3980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3980 
Symbol 
ID8667274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4434586 
End bp4435539 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content76% 
IMG OID 
Producthelix-turn-helix type 11 domain-containing protein 
Protein accessionYP_003339633 
Protein GI271965437 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.26771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTGCGG CCAGGTTGAT GTCGTTGGTG CTGTTGCTCC AGGCCCGTGG AGGCATGACC 
GCCACGGAGC TCTCCCGAGA GCTGGAGGTC TCCGAACGGA CCGTCCACCG GGACGTGCTG
GCCCTGTCGG AGGCCGGGGT GCCGGTCTAC GCCGACCGCG GCCGGGGCGG GGGATACCGG
CTGCTGGACG GATACCGCAC CCGCCTGACG GGGCTGGACC GCGCGGAGGC CGAGGCGCTT
TTCCTGTCCG GCGTGCCGGA GGCGCTGCGG GAGATGGGGC TGAGCGGGGT GGCGGCCACG
GCGCGGCTGA AGGCCTCGGC CGCGCTGTCG CCCGGCGTGC GCGACGCGCC CGCGACGGCC
GCCCAGCGCT TCCACCTGGA CGCCCCCGGC TGGTTCGCGA GCGAGAGGCC GCCTCCGGAG
GCGCTGGCGC CGCTGGCCAG GGCCGTGTGG GGCGACCATC CGGTCACCGC GCTCTACCGG
GGGGCCGAGC GGACGCTGGA GCCGTACGGG CTCGTGCTCA AGGCCGGTGT CTGGTATCTG
GCGACCCGAT CCGCGATCTA CCGGGTGGAC CGCTTCGCCG AGGTCGGGAT CCACTCCGAC
CGGCGCTTCG AGCGGGACCG CGGCTTCGAC CTGGCGGCGT TCTGGAGCGG TCGCGCCGCC
GAGTTCGCCC GCTCCCTGCT CACCACGCGT GTCACCGTAC GGCTCAGCCC CGCCGGCCAC
CGCCTGCTGC CGCACGTGGC CGACCCCGCG GCCCTCGGCG ACGCGCTGGC GTCGGCCGGG
GAGCCCGACG GCCAGGGCCG GATCACGCTG TCGCTGCCCG TGGAGTCGCT GGAGGTCGCC
TACGCCCAGA TCCTCCGGTT CGGCCCGGAG GCCGAGGTCC TCGACCCGCC CGAGCTCCGC
GCCCGCCTGG CCGGAGCCGC CGCGCGGCTG CGGGCCCTGT ACGGCCGGGC CTGA
 
Protein sequence
MRAARLMSLV LLLQARGGMT ATELSRELEV SERTVHRDVL ALSEAGVPVY ADRGRGGGYR 
LLDGYRTRLT GLDRAEAEAL FLSGVPEALR EMGLSGVAAT ARLKASAALS PGVRDAPATA
AQRFHLDAPG WFASERPPPE ALAPLARAVW GDHPVTALYR GAERTLEPYG LVLKAGVWYL
ATRSAIYRVD RFAEVGIHSD RRFERDRGFD LAAFWSGRAA EFARSLLTTR VTVRLSPAGH
RLLPHVADPA ALGDALASAG EPDGQGRITL SLPVESLEVA YAQILRFGPE AEVLDPPELR
ARLAGAAARL RALYGRA