Gene Sros_3944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3944 
Symbol 
ID8667234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4389108 
End bp4389659 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content66% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003339598 
Protein GI271965402 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000137534 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00939559 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGGGAAA ACGCCGACAC CCGGACACGG ATTCAGGAGA TCGCCCTGAA GCTCTTCGTC 
GAGCAGGGGT ATGAGGCGAC CTCGCTCCGC GAGATAGCGG AGGCGCTCGG CGTGACCAAG
GCCGCACTCT ACTATCACTT CAAGAGCAAG GACGAGATCG TCACCAGCCT CGTGGAGGAC
CGGGTGCGCT CGATCGACGA GCTGGTCGCC TGGGCCAGGG AGCAGCCGCG CACCGACGAG
ACCCGCCGGG AGCTGGTCCG CCGCTACTCC GATGACCTGC ACAGGGGCCG GCACCGCGAG
ATCATGCGCT TCTTCGAGCG CAACCAGACC GCGCTGAAGC ACCATCCGGT GATGGAGAAG
AACCGCGACC GGATGTTCGA GGTGCTCGCC TTCATCGTCG ACCCGGACGA CCCGCCGACC
GTCCGGCTGA GGAACTCGAT GGCCATGTTC GCCCTGCACG CGGCCTGGTT CGCCCTCAAG
GACGACAAGA TCTCCGAAGA GGAGAGCAGG GCCGCCGCCC TGGAGGTCGC GCTCGAACTC
CTCCAGCGGT GA
 
Protein sequence
MRENADTRTR IQEIALKLFV EQGYEATSLR EIAEALGVTK AALYYHFKSK DEIVTSLVED 
RVRSIDELVA WAREQPRTDE TRRELVRRYS DDLHRGRHRE IMRFFERNQT ALKHHPVMEK
NRDRMFEVLA FIVDPDDPPT VRLRNSMAMF ALHAAWFALK DDKISEEESR AAALEVALEL
LQR